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Traditionally, parameter estimation in biophysical neuron and neural network models usually adopts a global search algorithm, often combined with a local search method in order to minimize the value of a cost function, which measures the…

Quantitative Methods · Quantitative Biology 2012-03-05 Dimitrios V. Vavoulis , Volko A. Straub , John A. D. Aston , Jianfeng Feng

A computer model is described which is used to assess the dynamical complexity of a class of networks of spiking neurons with small-world properties. Networks are constructed by forming an initially segregated set of highly intra-connected…

Biological Physics · Physics 2009-11-13 Murray Shanahan

Complex time-varying systems are often studied by abstracting away from the dynamics of individual components to build a model of the population-level dynamics from the start. However, when building a population-level description, it can be…

Neurons and Cognition · Quantitative Biology 2022-10-21 Ran Liu , Mehdi Azabou , Max Dabagia , Jingyun Xiao , Eva L. Dyer

Recurrent Neural Networks (RNNs) are widely used for modelling neural activity, yet the mathematical interplay of core procedures is used to analyze them (temporal rescaling, discretization, and linearization) remain uncharacterized. This…

Neural and Evolutionary Computing · Computer Science 2025-04-08 Mariano Caruso , Cecilia Jarne

Recurrent neural networks in the chaotic regime exhibit complex dynamics reminiscent of high-level cortical activity during behavioral tasks. However, existing training methods for such networks are either biologically implausible, or…

Neurons and Cognition · Quantitative Biology 2015-12-09 Thomas Miconi

This paper introduces a new approach to reconstruct cosmological functions using artificial neural networks based on observational measurements with minimal theoretical and statistical assumptions. By using neural networks, we can generate…

Cosmology and Nongalactic Astrophysics · Physics 2023-04-24 Isidro Gómez-Vargas , Ricardo Medel Esquivel , Ricardo García-Salcedo , J. Alberto Vázquez

Recurrent auto-encoder model summarises sequential data through an encoder structure into a fixed-length vector and then reconstructs the original sequence through the decoder structure. The summarised vector can be used to represent time…

Machine Learning · Computer Science 2025-10-16 Timothy Wong , Zhiyuan Luo

In this paper we present a foundational study on a constrained method that defines learning problems with Neural Networks in the context of the principle of least cognitive action, which very much resembles the principle of least action in…

Machine Learning · Computer Science 2020-09-02 Alessandro Betti , Marco Gori , Simone Marullo , Stefano Melacci

The discovery of structure from time series data is a key problem in fields of study working with complex systems. Most identifiability results and learning algorithms assume the underlying dynamics to be discrete in time. Comparatively…

Machine Learning · Statistics 2022-02-04 Alexis Bellot , Kim Branson , Mihaela van der Schaar

Neurons convert the external stimuli into action potentials, or spikes, and encode the contained information into the biological nerve system. Despite the complexity of neurons and the synaptic interactions in between, the rate models are…

Neurons and Cognition · Quantitative Biology 2021-09-28 Chia-Ying Lin , Ping-Han Chen , Hsiu-Hau Lin , Wen-Min Huang

In science, we are often interested in obtaining a generative model of the underlying system dynamics from observed time series. While powerful methods for dynamical systems reconstruction (DSR) exist when data come from a single domain,…

Machine Learning · Computer Science 2025-02-18 Manuel Brenner , Elias Weber , Georgia Koppe , Daniel Durstewitz

Neural signals are characterized by rich temporal and spatiotemporal dynamics that reflect the organization of cortical networks. Theoretical research has shown how neural networks can operate at different dynamic ranges that correspond to…

Neurons and Cognition · Quantitative Biology 2017-07-05 Luca Ambrogioni , Marcel A. J. van Gerven , Eric Maris

Deep neural network architectures often consist of repetitive structural elements. We introduce an approach that reveals these patterns and can be broadly applied to the study of deep learning. Similarly to how a power strip helps untangle…

Statistical Mechanics · Physics 2025-07-03 Donghee Lee , Hye-Sung Lee , Jaeok Yi

Extensive research on graph-based dynamics and control of multi-agent systems has successfully demonstrated control of robotic swarms, where each robot is perceived as an independent agent virtually connected by a network topology. The…

Systems and Control · Electrical Eng. & Systems 2025-03-05 Jonathan Lane , Nak-seung Patrick Hyun

Reverberating dynamics of neural network is modelled on PC in order to illustrate possible role of inhibition as binding controller in the network. The network is composed of binding neurons. In the binding neuron model the degree of…

Neurons and Cognition · Quantitative Biology 2013-05-17 Alexander Vidybida

We present an approach for the visualisation of a set of time series that combines an echo state network with an autoencoder. For each time series in the dataset we train an echo state network, using a common and fixed reservoir of hidden…

Instrumentation and Methods for Astrophysics · Physics 2016-01-22 Nikolaos Gianniotis , Sven D. Kügler , Peter Tiňo , Kai L. Polsterer

We present a neural network approach for closed-loop deep brain stimulation (DBS). We cast the problem of finding an optimal neurostimulation strategy as a control problem. In this setting, control policies aim to optimize therapeutic…

Optimization and Control · Mathematics 2023-11-14 Malvern Madondo , Deepanshu Verma , Lars Ruthotto , Nicholas Au Yong

Many real-world complex systems, such as epidemic spreading networks and ecosystems, can be modeled as networked dynamical systems that produce multivariate time series. Learning the intrinsic dynamics from observational data is pivotal for…

Machine Learning · Computer Science 2024-12-30 Yanna Ding , Zijie Huang , Malik Magdon-Ismail , Jianxi Gao

Computing the state-space topology of a dynamical system from scalar data requires accurate reconstruction of those dynamics and construction of an appropriate simplicial complex from the results. The reconstruction process involves a…

Dynamical Systems · Mathematics 2016-10-12 Joshua Garland , Elizabeth Bradley , James D. Meiss

Recently, skeleton based action recognition gains more popularity due to cost-effective depth sensors coupled with real-time skeleton estimation algorithms. Traditional approaches based on handcrafted features are limited to represent the…

Computer Vision and Pattern Recognition · Computer Science 2017-04-13 Hongsong Wang , Liang Wang