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We present a general method for reconstruction of a network of nonlinearly coupled neural fields from the observations. A prominent example of such a system is a dynamical random neural network model studied by Sompolinsky et. al [Phys.…

Chaotic Dynamics · Physics 2017-11-16 A. Pikovsky

We propose a novel method to reconstruct phase dynamics equations from responses in macroscopic variables to weak inputs. Developing linear and nonlinear response theories in coupled phase-oscillators, we derive formulae which connect the…

Adaptation and Self-Organizing Systems · Physics 2023-01-06 Yoshiyuki Y. Yamaguchi , Yu Terada

Reconstructing the equation of motion and thus the network topology of a system from time series is a very important problem. Although many powerful methods have been developed, it remains a great challenge to deal with systems in high…

Adaptation and Self-Organizing Systems · Physics 2023-08-16 Zishuo Yan , Lili Gui , Kun Xu , Yueheng Lan

Many dynamical processes of complex systems can be understood as the dynamics of a group of nodes interacting on a given network structure. However, finding such interaction structure and node dynamics from time series of node behaviours is…

Physics and Society · Physics 2022-06-28 Yan Zhang , Yu Guo , Zhang Zhang , Mengyuan Chen , Shuo Wang , Jiang Zhang

We propose a conceptually novel method of reconstructing the topology of dynamical networks. By examining the correlation between the variable of one node and the derivative of another node, we derive a simple matrix equation yielding the…

Data Analysis, Statistics and Probability · Physics 2015-06-11 Zoran Levnajić

A method of network reconstruction from the dynamical time series is introduced, relying on the concept of derivative-variable correlation. Using a tunable observable as a parameter, the reconstruction of any network with known interaction…

Data Analysis, Statistics and Probability · Physics 2013-10-29 Zoran Levnajić , Arkady Pikovsky

We introduce and study a new model of interacting neural networks, incorporating the spatial dimension (e.g. position of neurons across the cortex) and some learning processes. The dynamic of each neural network is described via the elapsed…

Analysis of PDEs · Mathematics 2020-09-03 Delphine Salort , Nicolas Torres

Reconstructing network dynamics from data is crucial for predicting the changes in the dynamics of complex systems such as neuron networks; however, previous research has shown that the reconstruction is possible under strong constraints…

Dynamical Systems · Mathematics 2023-04-07 Irem Topal , Deniz Eroglu

Empirically observed time series in physics, biology, or medicine, are commonly generated by some underlying dynamical system (DS) which is the target of scientific interest. There is an increasing interest to harvest machine learning…

Machine Learning · Computer Science 2022-07-07 Daniel Kramer , Philine Lou Bommer , Carlo Tombolini , Georgia Koppe , Daniel Durstewitz

Novel method of reconstructing dynamical networks from empirically measured time series is proposed. By examining the variable--derivative correlation of network node pairs, we derive a simple equation that directly yields the adjacency…

Data Analysis, Statistics and Probability · Physics 2012-10-09 Zoran Levnajić

We propose a novel nonlinear bidirectionally coupled heterogeneous chain network whose dynamics evolve in discrete time. The backbone of the model is a pair of popular map-based neuron models, the Chialvo and the Rulkov maps. This model is…

Adaptation and Self-Organizing Systems · Physics 2024-05-14 Indranil Ghosh , Anjana S. Nair , Hammed Olawale Fatoyinbo , Sishu Shankar Muni

We review several of the most widely used techniques for training recurrent neural networks to approximate dynamical systems, then describe a novel algorithm for this task. The algorithm is based on an earlier theoretical result that…

Neural and Evolutionary Computing · Computer Science 2016-06-09 Adam Trischler , Gabriele MT D'Eleuterio

This paper presents an overview of some techniques and concepts coming from dynamical system theory and used for the analysis of dynamical neural networks models. In a first section, we describe the dynamics of the neuron, starting from the…

Adaptation and Self-Organizing Systems · Physics 2011-11-09 B. Cessac , M. Samuelides

Gene regulation is a dynamic process that underlies all aspects of human development, disease response, and other key biological processes. The reconstruction of temporal gene regulatory networks has conventionally relied on regression…

Quantitative Methods · Quantitative Biology 2024-10-04 Euxhen Hasanaj , Barnabás Póczos , Ziv Bar-Joseph

We propose the use of recurrent neural networks for classifying phases of matter based on the dynamics of experimentally accessible observables. We demonstrate this approach by training recurrent networks on the magnetization traces of two…

Disordered Systems and Neural Networks · Physics 2018-08-22 Evert van Nieuwenburg , Eyal Bairey , Gil Refael

This study investigates how dynamical systems may be learned and modelled with a neuromorphic network which is itself a dynamical system. The neuromorphic network used in this study is based on a complex electrical circuit comprised of…

Disordered Systems and Neural Networks · Physics 2025-10-24 Yinhao Xu , Georg A. Gottwald , Zdenka Kuncic

To understand the behavior of a neural circuit it is a presupposition that we have a model of the dynamical system describing this circuit. This model is determined by several parameters, including not only the synaptic weights, but also…

Neural and Evolutionary Computing · Computer Science 2016-08-23 J. Fischer , P. Manoonpong , S. Lackner

Deep neural networks are among the most widely applied machine learning tools showing outstanding performance in a broad range of tasks. We present a method for folding a deep neural network of arbitrary size into a single neuron with…

Machine Learning · Computer Science 2021-09-15 Florian Stelzer , André Röhm , Raul Vicente , Ingo Fischer , Serhiy Yanchuk

Spiking neural networks (SNNs) are promising for neuromorphic computing, but high-performing models still rely on dense multilayer architectures with substantial communication and state-storage costs. Inspired by autapses, we propose…

Neural and Evolutionary Computing · Computer Science 2026-03-27 Wuque Cai , Hongze Sun , Quan Tang , Shifeng Mao , Zhenxing Wang , Jiayi He , Duo Chen , Dezhong Yao , Daqing Guo

We present a computational algebra solution to reverse engineering the network structure of discrete dynamical systems from data. We use monomial ideals to determine dependencies between variables that encode constraints on the possible…

Quantitative Methods · Quantitative Biology 2022-12-07 Heather A. Harrington , Mike Stillman , Alan Veliz-Cuba
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