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We present TreeON, a novel neural-based framework for reconstructing detailed 3D tree point clouds from sparse top-down geodata, using only a single orthophoto and its corresponding Digital Surface Model (DSM). Our method introduces a new…

Graphics · Computer Science 2026-03-12 Angeliki Grammatikaki , Johannes Eschner , Pedro Hermosilla , Oscar Argudo , Manuela Waldner

Many recent medical segmentation systems rely on powerful deep learning models to solve highly specific tasks. To maximize performance, it is standard practice to evaluate numerous pipelines with varying model topologies, optimization…

Machine Learning · Computer Science 2019-11-06 Mathias Perslev , Erik Bjørnager Dam , Akshay Pai , Christian Igel

Accurate spatiotemporal image reconstruction methods are needed for a wide range of biomedical research areas but face challenges due to data incompleteness and computational burden. Data incompleteness arises from the undersampling often…

Image and Video Processing · Electrical Eng. & Systems 2024-10-10 Luke Lozenski , Refik Mert Cam , Mark D. Pagel , Mark A. Anastasio , Umberto Villa

Mental disorders are among the most widespread diseases globally. Analyzing functional brain networks through functional magnetic resonance imaging (fMRI) is crucial for understanding mental disorder behaviors. Although existing fMRI-based…

Neural and Evolutionary Computing · Computer Science 2025-05-26 Jun-En Ding , Dongsheng Luo , Anna Zilverstand , Kaustubh Kulkarni , Feng Liu

Reconstructing 3D human heads in low-view settings presents technical challenges, mainly due to the pronounced risk of overfitting with limited views and high-frequency signals. To address this, we propose geometry decomposition and adopt a…

Computer Vision and Pattern Recognition · Computer Science 2023-08-21 Baixin Xu , Jiarui Zhang , Kwan-Yee Lin , Chen Qian , Ying He

Deep neural networks are among the most widely applied machine learning tools showing outstanding performance in a broad range of tasks. We present a method for folding a deep neural network of arbitrary size into a single neuron with…

Machine Learning · Computer Science 2021-09-15 Florian Stelzer , André Röhm , Raul Vicente , Ingo Fischer , Serhiy Yanchuk

Biological sensing and processing is asynchronous and sparse, leading to low-latency and energy-efficient perception and action. In robotics, neuromorphic hardware for event-based vision and spiking neural networks promises to exhibit…

Following rapid advancements in text and image generation, research has increasingly shifted towards 3D generation. Unlike the well-established pixel-based representation in images, 3D representations remain diverse and fragmented,…

This paper presents a neural network built upon Transformers, namely PlaneTR, to simultaneously detect and reconstruct planes from a single image. Different from previous methods, PlaneTR jointly leverages the context information and the…

Computer Vision and Pattern Recognition · Computer Science 2021-07-29 Bin Tan , Nan Xue , Song Bai , Tianfu Wu , Gui-Song Xia

Spiking neural networks (SNNs) are promising for neuromorphic computing, but high-performing models still rely on dense multilayer architectures with substantial communication and state-storage costs. Inspired by autapses, we propose…

Neural and Evolutionary Computing · Computer Science 2026-03-27 Wuque Cai , Hongze Sun , Quan Tang , Shifeng Mao , Zhenxing Wang , Jiayi He , Duo Chen , Dezhong Yao , Daqing Guo

Research in medical imaging primarily focuses on discrete data representations that poorly scale with grid resolution and fail to capture the often continuous nature of the underlying signal. Neural Fields (NFs) offer a powerful alternative…

Image and Video Processing · Electrical Eng. & Systems 2026-03-06 Paul Friedrich , Florentin Bieder , Julian McGinnis , Julia Wolleb , Daniel Rueckert , Philippe C. Cattin

In this study, we proposed and validated a multi-atlas guided 3D fully convolutional network (FCN) ensemble model (M-FCN) for segmenting brain regions of interest (ROIs) from structural magnetic resonance images (MRIs). One major limitation…

Computer Vision and Pattern Recognition · Computer Science 2023-08-11 Jiong Wu , Xiaoying Tang

In this paper, we propose an online multi-spectral neuron tracing method with uniquely designed modules, where no offline training are required. Our method is trained online to update our enhanced discriminative correlation filter to…

Neurons and Cognition · Quantitative Biology 2024-03-12 Bin Duan , Yuzhang Shang , Dawen Cai , Yan Yan

Recent successes in deep learning have started to impact neuroscience. Of particular significance are claims that current segmentation algorithms achieve "super-human" accuracy in an area known as connectomics. However, as we will show,…

Computer Vision and Pattern Recognition · Computer Science 2020-01-20 Drew Linsley , Junkyung Kim , David Berson , Thomas Serre

Identifying complex neural circuitry from electron microscopic (EM) images may help unlock the mysteries of the brain. However, identifying this circuitry requires time-consuming, manual tracing (proofreading) due to the size and intricacy…

Quantitative Methods · Quantitative Biology 2014-09-04 Stephen M. Plaza

Artificial neural networks which are inspired from the learning mechanism of brain have achieved great successes in many problems, especially those with deep layers. In this paper, we propose a nucleus neural network (NNN) and corresponding…

Computer Vision and Pattern Recognition · Computer Science 2019-05-15 Jia Liu , Maoguo Gong , Haibo He

Medical images used in clinical practice are heterogeneous and not the same quality as scans studied in academic research. Preprocessing breaks down in extreme cases when anatomy, artifacts, or imaging parameters are unusual or protocols…

Image and Video Processing · Electrical Eng. & Systems 2022-08-31 Mostafa Mehdipour Ghazi , Mads Nielsen

Recent methods for 3D reconstruction and rendering increasingly benefit from end-to-end optimization of the entire image formation process. However, this approach is currently limited: effects of the optical hardware stack and in particular…

Computer Vision and Pattern Recognition · Computer Science 2023-04-12 Wenqi Xian , Aljaž Božič , Noah Snavely , Christoph Lassner

Restoring images affected by various types of degradation, such as noise, blur, or improper exposure, remains a significant challenge in computer vision. While recent trends favor complex monolithic all-in-one architectures, these models…

Computer Vision and Pattern Recognition · Computer Science 2026-03-31 Joanna Wiekiera , Martyna Zur

Understanding the dynamic reorganization of brain networks is critical for predicting cognitive decline, neurological progression, and individual variability in clinical outcomes. This work proposes a multimodal graph neural network…

Machine Learning · Computer Science 2026-02-11 Preksha Girish , Rachana Mysore , Kiran K. N. , Hiranmayee R. , Shipra Prashanth , Shrey Kumar