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In this paper, we propose a software tool, called AMYTISS, implemented in C++/OpenCL, for designing correct-by-construction controllers for large-scale discrete-time stochastic systems. This tool is employed to (i) build finite Markov…

Systems and Control · Electrical Eng. & Systems 2020-05-14 Abolfazl Lavaei , Mahmoud Khaled , Sadegh Soudjani , Majid Zamani

We present our experience of porting the code used in the wave-packet convergent-close-coupling (WP-CCC) approach to run on NVIDIA V100 and AMD MI250X GPUs. The WP-CCC approach is a method used in the field of ion-atom collision physics to…

Computational Physics · Physics 2024-03-08 I. B. Abdurakhmanov , N. W. Antonio , M. Cytowski , A. S. Kadyrov

We present an algorithm specifically tailored for solving kinetic equations onto GPUs. The efficiency of the algorithm is demonstrated by solving the one-dimensional shock wave structure problem and a two-dimensional low Mach number driven…

Computational Physics · Physics 2012-05-03 Aldo Frezzotti , Gian Pietro Ghiroldi , Livio Gibelli

Fluid simulations are often performed using the incompressible Navier-Stokes equations (INSE), leading to sparse linear systems which are difficult to solve efficiently in parallel. Recently, kinetic methods based on the…

Graphics · Computer Science 2021-01-29 Yixin Chen , Wei Li , Rui Fan , Xiaopei Liu

PLUMED is an open-source software package that is widely used for analyzing and enhancing molecular dynamics simulations that works in conjunction with most available molecular dynamics softwares. While the computational cost of PLUMED…

Computational Physics · Physics 2025-11-05 Daniele Rapetti , Massimiliano Bonomi , Carlo Camilloni , Giovanni Bussi , Gareth A. Tribello

In this work, we design and implement VQ-LLM, an efficient fused Vector Quantization (VQ) kernel generation framework. We first introduce a software abstraction called codebook cache to optimize codebook access efficiency and support the…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-07-01 Zihan Liu , Xinhao Luo , Junxian Guo , Wentao Ni , Yangjie Zhou , Yue Guan , Cong Guo , Weihao Cui , Yu Feng , Minyi Guo , Yuhao Zhu , Minjia Zhang , Jingwen Leng , Chen Jin

Algorithmic formulations of GPU programs provide a high-level alternative to device-specific code by expressing computations as compositions of well-defined parallel primitives (e.g., map, sort, reduce), rather than through handcrafted GPU…

Computational Physics · Physics 2026-04-21 Raphael Maggio-Aprile , Maxime Rambosson , Christophe Coreixas , Jonas Latt

As high-performance computing (HPC) systems rapidly evolve, with increasing on-node parallelism and widespread use of accelerators, understanding how the code maps to hardware is essential for reaching optimal performance. Benchmarks are…

Distributed, Parallel, and Cluster Computing · Computer Science 2026-05-11 Michael McKinsey , Stephanie Brink , Olga Pearce

The supercomputing platforms available for high performance computing based research evolve at a great rate. However, this rapid development of novel technologies requires constant adaptations and optimizations of the existing codes for…

High Energy Physics - Lattice · Physics 2017-02-23 Marina Krstic Marinkovic , Luka Stanisic

Existing GPU libraries often struggle to fully exploit the parallel resources and on-chip memory (SRAM) of GPUs when chaining multiple GPU functions as individual kernels. While Kernel Fusion (KF) techniques like Horizontal Fusion (HF) and…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-09-09 Oscar Amoros , Albert Andaluz , Johnny Nunez , Antonio J. Pena

LLM-based Triton kernel generation has attracted significant interest, yet a fundamental empirical question remains unanswered: where does this capability break down, and why? We present KernelBenchX, a benchmark designed to answer this…

Machine Learning · Computer Science 2026-05-12 Han Wang , Jintao Zhang , Kai Jiang , Haoxu Wang , Jianfei Chen , Jun Zhu

In this paper we describe and demonstrate a C++ code written to determine the trajectory of particles traversing oriented single crystals and a CUDA code written to evaluate the radiation spectra from charged particles with arbitrary…

Computational Physics · Physics 2019-10-24 Christian Flohr Nielsen

General purpose computing on graphic processing units (GPU) is a potential method of speeding up scientific computation with low cost and high energy efficiency. We experimented with the particle physics simulation toolkit Geant4 used at…

Computational Physics · Physics 2012-09-25 Otto Seiskari , Jukka Kommeri , Tapio Niemi

GX is a code for solving the nonlinear gyrokinetic system for low-frequency turbulence in magnetized plasmas, particularly tokamaks and stellarators. In GX, our primary motivation and target is a fast gyrokinetic solver that can be used for…

Plasma Physics · Physics 2024-04-30 N. R. Mandell , W. Dorland , I. Abel , R. Gaur , P. Kim , M. Martin , T. Qian

We introduce custom code generation for parametrized convex optimization problems that supports evaluating the derivative of the solution with respect to the parameters, i.e., differentiating through the optimization problem. We extend the…

Optimization and Control · Mathematics 2025-04-22 Maximilian Schaller , Stephen Boyd

A high-performance implementation of a multiphase lattice Boltzmann method based on the conservative Allen-Cahn model supporting high-density ratios and high Reynolds numbers is presented. Metaprogramming techniques are used to generate…

Fluid Dynamics · Physics 2020-12-14 Markus Holzer , Martin Bauer , Ulrich Rüde

Modern GPUs are able to perform significantly more arithmetic operations than transfers of a single word to or from global memory. Hence, many GPU kernels are limited by memory bandwidth and cannot exploit the arithmetic power of GPUs.…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-09-13 J. Filipovič , M. Madzin , J. Fousek , L. Matyska

In recent years, it has become increasingly common for high performance computers (HPC) to possess some level of heterogeneous architecture - typically in the form of GPU accelerators. In some machines these are isolated within a dedicated…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-10-19 I. Zacharoudiou , J. W. S. McCullough , P. V. Coveney

Compiling quantum circuits to account for hardware restrictions is an essential part of the quantum computing stack. Circuit compilation allows us to adapt algorithm descriptions into a sequence of operations supported by real quantum…

Quantum Physics · Physics 2025-10-14 Alejandro Villoria , Henning Basold , Alfons Laarman

Performance profiles of GPU kernels generated by tools such as Nsight Compute are rich in detail but are often challenging to interpret. To achieve the best performance possible on a given GPU architecture, kernel developers need to spend…

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