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Large Language Models (LLMs) have achieved strong complex reasoning capabilities through Chain-of-Thought (CoT) reasoning. However, their reasoning patterns remain too complicated to analyze. While Sparse Autoencoders (SAEs) have emerged as…

Machine Learning · Computer Science 2026-03-04 Xuan Yang , Jiayu Liu , Yuhang Lai , Hao Xu , Zhenya Huang , Ning Miao

Sparse Mixtures of Experts (SMoE) scales model capacity without significant increases in training and inference costs, but exhibits the following two issues: (1) Low expert activation, where only a small subset of experts are activated for…

Computation and Language · Computer Science 2024-04-24 Xun Wu , Shaohan Huang , Wenhui Wang , Furu Wei

Autoencoders have been widely used as a nonlinear tool for data dimensionality reduction. While autoencoders don't utilize the label information, Centroid-Encoders (CE)\cite{ghosh2022supervised} use the class label in their learning…

Machine Learning · Computer Science 2022-06-30 Tomojit Ghosh , Michael Kirby

Data-centric AI encourages the need of cleaning and understanding of data in order to achieve trustworthy AI. Existing technologies, such as AutoML, make it easier to design and train models automatically, but there is a lack of a similar…

Machine Learning · Computer Science 2022-03-10 Girmaw Abebe Tadesse , William Ogallo , Celia Cintas , Skyler Speakman

Transformer models have become state-of-the-art in decoding stimuli and behavior from neural activity, significantly advancing neuroscience research. Yet greater transparency in their decision-making processes would substantially enhance…

Quantitative Methods · Quantitative Biology 2025-06-18 Laurence Freeman , Philip Shamash , Vinam Arora , Caswell Barry , Tiago Branco , Eva Dyer

Sparse Autoencoder (SAE) has emerged as a powerful tool for mechanistic interpretability of large language models. Recent works apply SAE to protein language models (PLMs), aiming to extract and analyze biologically meaningful features from…

Quantitative Methods · Quantitative Biology 2026-01-21 Xiangyu Liu , Haodi Lei , Yi Liu , Yang Liu , Wei Hu

Recovering meaningful concepts from language model activations is a central aim of interpretability. While existing feature extraction methods aim to identify concepts that are independent directions, it is unclear if this assumption can…

Predicting protein function from amino acid sequence remains a central challenge in data-scarce (low-$N$) regimes, limiting machine learning-guided protein design when only small amounts of assay-labeled sequence-function data are…

Machine Learning · Computer Science 2025-08-27 Darin Tsui , Kunal Talreja , Amirali Aghazadeh

Radiological services are experiencing unprecedented demand, leading to increased interest in automating radiology report generation. Existing Vision-Language Models (VLMs) suffer from hallucinations, lack interpretability, and require…

Computer Vision and Pattern Recognition · Computer Science 2024-10-07 Ahmed Abdulaal , Hugo Fry , Nina Montaña-Brown , Ayodeji Ijishakin , Jack Gao , Stephanie Hyland , Daniel C. Alexander , Daniel C. Castro

Sparse mixture of expert architectures (MoEs) scale model capacity without significant increases in training or inference costs. Despite their success, MoEs suffer from a number of issues: training instability, token dropping, inability to…

Machine Learning · Computer Science 2024-05-28 Joan Puigcerver , Carlos Riquelme , Basil Mustafa , Neil Houlsby

Sparse autoencoders (SAEs) are now standard tools for decomposing language model activations into interpretable features, and automated interpretability pipelines routinely assign each feature a short natural-language explanation. Existing…

Machine Learning · Computer Science 2026-05-14 Jordan F. McCann

Major complications arise from the recent increase in the amount of high-dimensional data, including high computational costs and memory requirements. Feature selection, which identifies the most relevant and informative attributes of a…

Sparse Mixture of Experts (SMoEs) models scale the capacity of models while maintaining constant computational overhead. Early designs typically relied on a fixed value of $k$, where $k$ represents either the number of experts selected per…

Computation and Language · Computer Science 2025-10-28 Giang Do , Hung Le , Truyen Tran

Software vulnerabilities such as buffer overflows and SQL injections are a major source of security breaches. Traditional methods for vulnerability detection remain essential but are limited by high false positive rates, scalability issues,…

Software Engineering · Computer Science 2026-04-10 Rui Melo , Claudia Mamede , Andre Catarino , Rui Abreu , Henrique Lopes Cardoso

Large-scale text-to-image diffusion models have become the backbone of modern image editing, yet text prompts alone do not offer adequate control over the editing process. Two properties are especially desirable: disentanglement, where…

Graphics · Computer Science 2025-10-07 Ronen Kamenetsky , Sara Dorfman , Daniel Garibi , Roni Paiss , Or Patashnik , Daniel Cohen-Or

Inspite the emerging importance of Speech Emotion Recognition (SER), the state-of-the-art accuracy is quite low and needs improvement to make commercial applications of SER viable. A key underlying reason for the low accuracy is the…

Sound · Computer Science 2020-03-24 Siddique Latif , Rajib Rana , Sara Khalifa , Raja Jurdak , Julien Epps , Björn W. Schuller

High-dimensional data in many areas such as computer vision and machine learning tasks brings in computational and analytical difficulty. Feature selection which selects a subset from observed features is a widely used approach for…

Machine Learning · Computer Science 2018-04-10 Kai Han , Yunhe Wang , Chao Zhang , Chao Li , Chao Xu

Neural Audio Codecs (NACs) are widely adopted in modern speech systems, yet how they encode linguistic and paralinguistic information remains unclear. Improving the interpretability of NAC representations is critical for understanding and…

Time series foundation models (TSFMs) are increasingly deployed in high-stakes domains, yet their internal representations remain opaque. We present the first application of sparse autoencoders (SAEs) to a TSFM, training TopK SAEs on…

Machine Learning · Computer Science 2026-03-12 Anurag Mishra

This paper aims to improve the feature learning in Convolutional Networks (Convnet) by capturing the structure of objects. A new sparsity function is imposed on the extracted featuremap to capture the structure and shape of the learned…

Machine Learning · Computer Science 2017-01-03 Ehsan Hosseini-Asl
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