Dissecting Chronos: Sparse Autoencoders Reveal Causal Feature Hierarchies in Time Series Foundation Models
Abstract
Time series foundation models (TSFMs) are increasingly deployed in high-stakes domains, yet their internal representations remain opaque. We present the first application of sparse autoencoders (SAEs) to a TSFM, training TopK SAEs on activations of Chronos-T5-Large (710M parameters) across six layers. Through 392 single-feature ablation experiments, we establish that every ablated feature produces a positive CRPS degradation, confirming causal relevance. Our analysis reveals a depth-dependent hierarchy: early encoder layers encode low-level frequency features, the mid-encoder concentrates causally critical change-detection features, and the final encoder compresses a rich but less causally important taxonomy of temporal concepts. The most critical features reside in the mid-encoder (max single-feature Delta CRPS = 38.61), not in the semantically richest final encoder layer, where progressive ablation paradoxically improves forecast quality. These findings demonstrate that mechanistic interpretability transfers effectively to TSFMs and that Chronos-T5 relies on abrupt-dynamics detection rather than periodic pattern recognition.
Keywords
Cite
@article{arxiv.2603.10071,
title = {Dissecting Chronos: Sparse Autoencoders Reveal Causal Feature Hierarchies in Time Series Foundation Models},
author = {Anurag Mishra},
journal= {arXiv preprint arXiv:2603.10071},
year = {2026}
}
Comments
Accepted as a poster in ICLR 2026 Workshop on Time Series in the Age of Large Models (TSALM)