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Related papers: Decomposing The Dark Matter of Sparse Autoencoders

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Continuing advances in neural interfaces have enabled simultaneous monitoring of spiking activity from hundreds to thousands of neurons. To interpret these large-scale data, several methods have been proposed to infer latent dynamic…

Machine Learning · Computer Science 2019-08-23 Mohammad Reza Keshtkaran , Chethan Pandarinath

Sparse autoencoders (SAEs) are a promising approach for uncovering interpretable features in large language models (LLMs). While several automated evaluation methods exist for SAEs, most rely on external LLMs. In this work, we introduce…

Computation and Language · Computer Science 2025-09-30 Alex Gulko , Yusen Peng , Sachin Kumar

Intermediate layers of large language models (LLMs) best predict human brain responses to language, one of the most robust findings in computational neurolinguistics, yet why remains mechanistically unexplained. We address this gap by…

Computation and Language · Computer Science 2026-05-25 Dongxin Guo , Jikun Wu , Siu Ming Yiu

We present SAE-BrainMap, a novel framework that directly aligns deep learning visual model representations with voxel-level fMRI responses using sparse autoencoders (SAEs). First, we train layer-wise SAEs on model activations and compute…

Neurons and Cognition · Quantitative Biology 2025-06-16 Ziming Mao , Jia Xu , Zeqi Zheng , Haofang Zheng , Dabing Sheng , Yaochu Jin , Guoyuan Yang

Sparse dictionary learning (and, in particular, sparse autoencoders) attempts to learn a set of human-understandable concepts that can explain variation on an abstract space. A basic limitation of this approach is that it neither exploits…

Computation and Language · Computer Science 2025-06-03 Mark Muchane , Sean Richardson , Kiho Park , Victor Veitch

Probabilistic generative models are attractive for scientific modeling because their inferred parameters can be used to generate hypotheses and design experiments. This requires that the learned model provide an accurate representation of…

Machine Learning · Statistics 2023-01-18 Liyun Tu , Austin Talbot , Neil Gallagher , David Carlson

Deep learning, particularly with the advancement of Large Language Models, has transformed biomolecular modeling, with protein language models such as ESM inspiring emerging RNA language models such as RiNALMo. Recent work has begun…

Biomolecules · Quantitative Biology 2026-05-18 Taehan Kim , Sangdae Nam

Instruction tuning data are often quantity-saturated due to the large volume of data collection and fast model iteration, leaving data selection important but underexplored. Existing quality-driven data selection methods, such as LIMA…

Computation and Language · Computer Science 2025-04-02 Xianjun Yang , Shaoliang Nie , Lijuan Liu , Suchin Gururangan , Ujjwal Karn , Rui Hou , Madian Khabsa , Yuning Mao

Strong gravitational lensing can reveal the influence of dark-matter substructure in galaxies, but analyzing these effects from noisy, low-resolution images poses a significant challenge. In this work, we propose a masked autoencoder (MAE)…

A key challenge in AI alignment is guiding large language models (LLMs) to follow desired behaviors at test time. Activation steering, which modifies internal model activations during inference, offers a potential solution. However, prior…

Machine Learning · Computer Science 2025-03-04 Reza Bayat , Ali Rahimi-Kalahroudi , Mohammad Pezeshki , Sarath Chandar , Pascal Vincent

Finding sparse solutions of underdetermined systems of linear equations is a fundamental problem in signal processing and statistics which has become a subject of interest in recent years. In general, these systems have infinitely many…

Machine Learning · Statistics 2010-09-21 Arash Ali Amini , Massoud Babaie-Zadeh , Christian Jutten

Sparse autoencoders (SAEs) are used to disentangle the dense, polysemantic internal representations of large language models (LLMs) into interpretable, monosemantic concepts. However, standard $\ell_1$-regularized SAEs suffer from feature…

Machine Learning · Computer Science 2026-05-08 Faris Chaudhry , Keisuke Yano , Anthea Monod

Text-to-image (T2I) diffusion models often exhibit gender bias, particularly by generating stereotypical associations between professions and gendered subjects. This paper presents SAE Debias, a lightweight and model-agnostic framework for…

Machine Learning · Computer Science 2025-11-24 Chao Wu , Zhenyi Wang , Kangxian Xie , Naresh Kumar Devulapally , Vishnu Suresh Lokhande , Mingchen Gao

This paper shows that masked autoencoders (MAE) are scalable self-supervised learners for computer vision. Our MAE approach is simple: we mask random patches of the input image and reconstruct the missing pixels. It is based on two core…

Computer Vision and Pattern Recognition · Computer Science 2021-12-21 Kaiming He , Xinlei Chen , Saining Xie , Yanghao Li , Piotr Dollár , Ross Girshick

Sparse autoencoders are usually trained one layer at a time, even though transformer residual stream activations are strongly coupled across depth. This creates a practical problem for multi-layer interventions: different layerwise…

Machine Learning · Computer Science 2026-05-28 Prathyush Poduval , Calvin Yeung , Neel Desai , Mohsen Imani

Sparse autoencoders provide a promising unsupervised approach for extracting interpretable features from a language model by reconstructing activations from a sparse bottleneck layer. Since language models learn many concepts, autoencoders…

Machine Learning · Computer Science 2024-06-07 Leo Gao , Tom Dupré la Tour , Henk Tillman , Gabriel Goh , Rajan Troll , Alec Radford , Ilya Sutskever , Jan Leike , Jeffrey Wu

Although sparse autoencoders (SAEs) are crucial for identifying interpretable features in neural networks, it is still challenging to distinguish between real computational patterns and erroneous correlations. We introduce Model-X knockoffs…

Machine Learning · Computer Science 2025-11-18 Tsogt-Ochir Enkhbayar

Neural Audio Codecs (NACs) are widely adopted in modern speech systems, yet how they encode linguistic and paralinguistic information remains unclear. Improving the interpretability of NAC representations is critical for understanding and…

Sparse Autoencoders uncover thousands of features in vision models, yet explaining these features without requiring human intervention remains an open challenge. While previous work has proposed generating correlation-based explanations…

Computer Vision and Pattern Recognition · Computer Science 2026-03-26 Javier Ferrando , Enrique Lopez-Cuena , Pablo Agustin Martin-Torres , Daniel Hinjos , Anna Arias-Duart , Dario Garcia-Gasulla

What latent features are encoded in language model (LM) representations? Recent work on training sparse autoencoders (SAEs) to disentangle interpretable features in LM representations has shown significant promise. However, evaluating the…

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