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Related papers: MultiOrg: A Multi-rater Organoid-detection Dataset

200 papers

Plant diseases pose significant threats to agriculture. It necessitates proper diagnosis and effective treatment to safeguard crop yields. To automate the diagnosis process, image segmentation is usually adopted for precisely identifying…

Computer Vision and Pattern Recognition · Computer Science 2024-09-09 Tianqi Wei , Zhi Chen , Xin Yu , Scott Chapman , Paul Melloy , Zi Huang

Radiological analysis increasingly benefits from pretrained visual representations that can support heterogeneous downstream tasks across imaging modalities. In this work, we introduce OmniRad, a self-supervised radiological foundation…

Computer Vision and Pattern Recognition · Computer Science 2026-02-05 Luca Zedda , Andrea Loddo , Cecilia Di Ruberto

We introduce the largest abdominal CT dataset (termed AbdomenAtlas) of 20,460 three-dimensional CT volumes sourced from 112 hospitals across diverse populations, geographies, and facilities. AbdomenAtlas provides 673K high-quality masks of…

This paper addresses the limitations of current datasets for 3D vision tasks in terms of accuracy, size, realism, and suitable imaging modalities for photometrically challenging objects. We propose a novel annotation and acquisition…

Computer Vision and Pattern Recognition · Computer Science 2023-08-22 HyunJun Jung , Patrick Ruhkamp , Nassir Navab , Benjamin Busam

Histopathology, the microscopic study of diseased tissue, is increasingly digitized, enabling improved visualization and streamlined workflows. An important task in histopathology is the segmentation of cells and glands, essential for…

Computer Vision and Pattern Recognition · Computer Science 2024-12-02 Philipp Endres , Valentin Koch , Julia A. Schnabel , Carsten Marr

Accurately annotated ultrasonic images are vital components of a high-quality medical report. Hospitals often have strict guidelines on the types of annotations that should appear on imaging results. However, manually inspecting these…

Image and Video Processing · Electrical Eng. & Systems 2023-07-11 Yuanheng Zhang , Nan Jiang , Zhaoheng Xie , Junying Cao , Yueyang Teng

Detecting 3D objects keypoints is of great interest to the areas of both graphics and computer vision. There have been several 2D and 3D keypoint datasets aiming to address this problem in a data-driven way. These datasets, however, either…

Computer Vision and Pattern Recognition · Computer Science 2020-08-10 Yang You , Yujing Lou , Chengkun Li , Zhoujun Cheng , Liangwei Li , Lizhuang Ma , Weiming Wang , Cewu Lu

Background and objective: The usage of machine learning in medical diagnosis and treatment has witnessed significant growth in recent years through the development of computer-aided diagnosis systems that are often relying on annotated…

Computer Vision and Pattern Recognition · Computer Science 2023-08-17 Mateja Napravnik , Franko Hržić , Sebastian Tschauner , Ivan Štajduhar

Segmentation of multiple organs-at-risk (OARs) is essential for radiation therapy treatment planning and other clinical applications. We developed an Automated deep Learning-based Abdominal Multi-Organ segmentation (ALAMO) framework based…

Image and Video Processing · Electrical Eng. & Systems 2020-08-25 Yuhua Chen , Dan Ruan , Jiayu Xiao , Lixia Wang , Bin Sun , Rola Saouaf , Wensha Yang , Debiao Li , Zhaoyang Fan

The goal of automatic report generation is to generate a clinically accurate and coherent phrase from a single given X-ray image, which could alleviate the workload of traditional radiology reporting. However, in a real-world scenario,…

Computer Vision and Pattern Recognition · Computer Science 2023-11-13 Tiancheng Gu , Dongnan Liu , Zhiyuan Li , Weidong Cai

Deep learning based methods for automatic organ segmentation have shown promise in aiding diagnosis and treatment planning. However, quantifying and understanding the uncertainty associated with model predictions is crucial in critical…

Image and Video Processing · Electrical Eng. & Systems 2023-08-16 Jadie Adams , Shireen Y. Elhabian

The task of labeling multiple organs for segmentation is a complex and time-consuming process, resulting in a scarcity of comprehensively labeled multi-organ datasets while the emergence of numerous partially labeled datasets. Current…

Computer Vision and Pattern Recognition · Computer Science 2024-07-18 Xiaoyu Liu , Linhao Qu , Ziyue Xie , Yonghong Shi , Zhijian Song

In the medical images field, semantic segmentation is one of the most important, yet difficult and time-consuming tasks to be performed by physicians. Thanks to the recent advancement in the Deep Learning models regarding Computer Vision,…

Image and Video Processing · Electrical Eng. & Systems 2023-09-21 Leonardo Crespi , Paolo Roncaglioni , Damiano Dei , Ciro Franzese , Nicola Lambri , Daniele Loiacono , Pietro Mancosu , Marta Scorsetti

Automated patient positioning is a crucial step in streamlining MRI workflows and enhancing patient throughput. RGB-D camera-based systems offer a promising approach to automate this process by leveraging depth information to estimate…

Computer Vision and Pattern Recognition · Computer Science 2025-04-01 Eytan Kats , Kai Geißler , Jochen G. Hirsch , Stefan Heldman , Mattias P. Heinrich

Traditional object detection models in medical imaging operate within a closed-set paradigm, limiting their ability to detect objects of novel labels. Open-vocabulary object detection (OVOD) addresses this limitation but remains…

Computer Vision and Pattern Recognition · Computer Science 2025-11-26 Tooba Tehreem Sheikh , Jean Lahoud , Rao Muhammad Anwer , Fahad Shahbaz Khan , Salman Khan , Hisham Cholakkal

With the increasing availability of new image registration approaches, an unbiased evaluation is becoming more needed so that clinicians can choose the most suitable approaches for their applications. Current evaluations typically use…

Computer Vision and Pattern Recognition · Computer Science 2020-03-24 Jie Luo , Guangshen Ma , Sarah Frisken , Parikshit Juvekar , Nazim Haouchine , Zhe Xu , Yiming Xiao , Alexandra Golby , Patrick Codd , Masashi Sugiyama , William Wells

Data cleaning consumes about 80% of the time spent on data analysis for clinical research projects. This is a much bigger problem in the era of big data and machine learning in the field of medicine where large volumes of data are being…

Medical Physics · Physics 2018-01-03 Timothy Rozario , Troy Long , Mingli Chen , Weiguo Lu , Steve Jiang

While 3D object detection and pose estimation has been studied for a long time, its evaluation is not yet completely satisfactory. Indeed, existing datasets typically consist in numerous acquisitions of only a few scenes because of the…

Computer Vision and Pattern Recognition · Computer Science 2018-06-22 Romain Brégier , Frédéric Devernay , Laetitia Leyrit , James Crowley

Segmentation of abdominal computed tomography(CT) provides spatial context, morphological properties, and a framework for tissue-specific radiomics to guide quantitative Radiological assessment. A 2015 MICCAI challenge spurred substantial…

Image and Video Processing · Electrical Eng. & Systems 2020-02-12 Yuchen Xu , Olivia Tang , Yucheng Tang , Ho Hin Lee , Yunqiang Chen , Dashan Gao , Shizhong Han , Riqiang Gao , Michael R. Savona , Richard G. Abramson , Yuankai Huo , Bennett A. Landman

In computer-assisted surgery, automatically recognizing anatomical organs is crucial for understanding the surgical scene and providing intraoperative assistance. While machine learning models can identify such structures, their deployment…

Computer Vision and Pattern Recognition · Computer Science 2024-11-22 Danush Kumar Venkatesh , Dominik Rivoir , Micha Pfeiffer , Fiona Kolbinger , Stefanie Speidel