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Related papers: MAFin: Motif Detection in Multiple Alignment Files

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We present a novel feature matching algorithm that systematically utilizes the geometric properties of features such as position, scale, and orientation, in addition to the conventional descriptor vectors. In challenging scenes with the…

Computer Vision and Pattern Recognition · Computer Science 2017-01-23 Sehyung Lee , Jongwoo Lim , Il Hong Suh

Accurate tumor segmentation in PET/CT images is crucial for computer-aided cancer diagnosis and treatment. The primary challenge lies in effectively integrating the complementary information from PET and CT images. In clinical settings, the…

Image and Video Processing · Electrical Eng. & Systems 2025-01-03 Yuxuan Qi , Li Lin , Jiajun Wang , Bin Zhang , Jingya Zhang

Trisomy, a form of aneuploidy wherein the cell possesses an additional copy of a specific chromosome, exhibits a high correlation with cancer. Studies from across different hosts, cell-lines, and labs into the cellular effects induced by…

Quantitative Methods · Quantitative Biology 2023-02-03 Roy Siegelmann , Hava Siegelmann

We describe a new global multiple alignment program capable of aligning a large number of genomic regions. Our progressive alignment approach incorporates the following ideas: maximum-likelihood inference of ancestral sequences, automatic…

Genomics · Quantitative Biology 2007-05-23 Nicolas Bray , Lior Pachter

Evolutionary modeling applications are the best way to provide full information to support in-depth understanding of evaluation of organisms. These applications mainly depend on identifying the evolutionary history of existing organisms and…

Computational Engineering, Finance, and Science · Computer Science 2018-06-01 Sara Shehab , Sameh Abdulah , Arabi E. Keshk

Pattern matching is a powerful tool which is part of many functional programming languages as well as computer algebra systems such as Mathematica. Among the existing systems, Mathematica offers the most expressive pattern matching.…

Symbolic Computation · Computer Science 2017-05-03 Manuel Krebber

Automating the creation of scientific diagrams from academic papers can significantly streamline the development of tutorials, presentations, and posters, thereby saving time and accelerating the process. Current text-to-image models…

Computation and Language · Computer Science 2024-10-17 Ishani Mondal , Zongxia Li , Yufang Hou , Anandhavelu Natarajan , Aparna Garimella , Jordan Boyd-Graber

This study presents an approach to lane detection involving the prediction of binary segmentation masks and per-pixel affinity fields. These affinity fields, along with the binary masks, can then be used to cluster lane pixels horizontally…

Computer Vision and Pattern Recognition · Computer Science 2021-08-23 Hala Abualsaud , Sean Liu , David Lu , Kenny Situ , Akshay Rangesh , Mohan M. Trivedi

Heterogeneous Information Networks (HIN) has been widely used in recommender systems (RSs). In previous HIN-based RSs, meta-path is used to compute the similarity between users and items. However, existing meta-path based methods only…

Social and Information Networks · Computer Science 2019-08-27 Huan Zhao , Yingqi Zhou , Yangqiu Song , Dik Lun Lee

Gait recognition is a biometric technology that has received extensive attention. Most existing gait recognition algorithms are unimodal, and a few multimodal gait recognition algorithms perform multimodal fusion only once. None of these…

Computer Vision and Pattern Recognition · Computer Science 2023-12-25 Shinan Zou , Jianbo Xiong , Chao Fan , Shiqi Yu , Jin Tang

Recent advancements in large multimodal models (LMMs) have leveraged extensive multimodal datasets to enhance capabilities in complex knowledge-driven tasks. However, persistent challenges in perceptual and reasoning errors limit their…

Multiperspective Fusion (MPF) is a novel posttraining alignment framework for large language models (LLMs) developed in response to the growing need for easy bias mitigation. Built on top of the SAGED pipeline, an automated system for…

Computation and Language · Computer Science 2025-07-04 Xin Guan , PeiHsin Lin , Zekun Wu , Ze Wang , Ruibo Zhang , Emre Kazim , Adriano Koshiyama

This work considers the task of representation learning on the attributed relational graph (ARG). Both the nodes and edges in an ARG are associated with attributes/features allowing ARGs to encode rich structural information widely observed…

Machine Learning · Computer Science 2022-08-10 Yifei Wang , Shiyang Chen , Guobin Chen , Ethan Shurberg , Hang Liu , Pengyu Hong

Many services today massively and continuously produce log files of different and varying formats. These logs are important since they contain information about the application activities, which is necessary for improvements by analyzing…

Information Retrieval · Computer Science 2023-04-11 Igor Cherepanov , Jonathan Geraldi Joewono , Arjan Kuijper , Jörn Kohlhammer

The use of social media websites and applications has become very popular and people share their photos on these networks. Automatic recognition and tagging of people's photos on these networks has raised privacy preservation issues and…

Computer Vision and Pattern Recognition · Computer Science 2022-01-11 Mohammad Hossein Khojaste , Nastaran Moradzadeh Farid , Ahmad Nickabadi

Survival prediction plays a crucial role in assisting clinicians with the development of cancer treatment protocols. Recent evidence shows that multimodal data can help in the diagnosis of cancer disease and improve survival prediction.…

Image and Video Processing · Electrical Eng. & Systems 2023-11-14 Ruiquan Ge , Xiangyang Hu , Rungen Huang , Gangyong Jia , Yaqi Wang , Renshu Gu , Changmiao Wang , Elazab Ahmed , Linyan Wang , Juan Ye , Ye Li

Inverse protein folding generates valid amino acid sequences that can fold into a desired protein structure, with recent deep-learning advances showing strong potential and competitive performance. However, challenges remain, such as…

Biomolecules · Quantitative Biology 2025-07-29 Peizhen Bai , Filip Miljković , Xianyuan Liu , Leonardo De Maria , Rebecca Croasdale-Wood , Owen Rackham , Haiping Lu

In this paper, we derive a new Kalman filter with probabilistic data association between measurements and states. We formulate a variational inference problem to approximate the posterior density of the state conditioned on the measurement…

Computer Vision and Pattern Recognition · Computer Science 2025-09-08 Hanwen Cao , George J. Pappas , Nikolay Atanasov

In animal facilities, continuous surveillance of penguins is essential yet technically challenging due to their homogeneous visual characteristics, rapid and frequent posture changes, and substantial environmental noise such as water…

Computer Vision and Pattern Recognition · Computer Science 2026-03-05 Kasumi Seko , Hiroki Kinoshita , Raj Rajeshwar Malinda , Hiroaki Kawashima

Recent advances in Vision Language Models (VLMs) have driven significant progress in visual reasoning. However, open-source VLMs still lag behind proprietary systems, largely due to the lack of high-quality reasoning data. Existing datasets…

Computer Vision and Pattern Recognition · Computer Science 2026-01-30 Honglin Lin , Zheng Liu , Yun Zhu , Chonghan Qin , Juekai Lin , Xiaoran Shang , Conghui He , Wentao Zhang , Lijun Wu
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