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Biological visual systems learn from limited experience, unlike deep learning models that rely on millions of training images. What learning principles make this possible? We tested whether efficient coding, the idea that neural…

Computer Vision and Pattern Recognition · Computer Science 2026-05-20 Ananya Passi , Brian S. Robinson , Michael F. Bonner

Neural generative models can be used to learn complex probability distributions from data, to sample from them, and to produce probability density estimates. We propose a computational framework for developing neural generative models…

Machine Learning · Computer Science 2022-01-06 Alexander Ororbia , Daniel Kifer

The human brain is the central hub of the neurobiological system, controlling behavior and cognition in complex ways. Recent advances in neuroscience and neuroimaging analysis have shown a growing interest in the interactions between brain…

Neurons and Cognition · Quantitative Biology 2023-05-25 Yi Yang , Hejie Cui , Carl Yang

Networks are ubiquitous in many real-world applications (e.g., social networks encoding trust/distrust relationships, correlation networks arising from time series data). While many networks are signed or directed, or both, there is a lack…

Machine Learning · Computer Science 2023-12-04 Yixuan He , Xitong Zhang , Junjie Huang , Benedek Rozemberczki , Mihai Cucuringu , Gesine Reinert

Large language models based on self-attention mechanisms have achieved astonishing performances not only in natural language itself, but also in a variety of tasks of different nature. However, regarding processing language, our human brain…

Computation and Language · Computer Science 2024-04-18 Chan Li , Junbin Qiu , Haiping Huang

In this paper we introduce GP+, an open-source library for kernel-based learning via Gaussian processes (GPs) which are powerful statistical models that are completely characterized by their parametric covariance and mean functions. GP+ is…

Machine Learning · Computer Science 2024-06-06 Amin Yousefpour , Zahra Zanjani Foumani , Mehdi Shishehbor , Carlos Mora , Ramin Bostanabad

A comprehensive artificial intelligence system needs to not only perceive the environment with different `senses' (e.g., seeing and hearing) but also infer the world's conditional (or even causal) relations and corresponding uncertainty.…

Machine Learning · Statistics 2021-01-07 Hao Wang , Dit-Yan Yeung

Predictive coding (PC) replaces global backpropagation with local optimization over weights and activations. We show that linear PC networks admit a natural formulation as cellular sheaves: the sheaf coboundary maps activations to edge-wise…

Machine Learning · Computer Science 2025-11-17 Jeffrey Seely

Predictive coding is a promising theoretical framework in neuroscience for understanding information transmission and perception. It posits that the brain perceives the external world through internal models and updates these models under…

Neurons and Cognition · Quantitative Biology 2022-09-07 Zhen-Ye Huang , Xin-Yi Fan , Jianwen Zhou , Hai-Jun Zhou

In this work we propose Neuro-Nav, an open-source library for neurally plausible reinforcement learning (RL). RL is among the most common modeling frameworks for studying decision making, learning, and navigation in biological organisms. In…

Neural and Evolutionary Computing · Computer Science 2022-06-08 Arthur Juliani , Samuel Barnett , Brandon Davis , Margaret Sereno , Ida Momennejad

Gaussian Processes (GPs) are flexible, nonparametric Bayesian models widely used for regression and classification because of their ability to capture complex data patterns and quantify predictive uncertainty. However, the O(n^3)…

Machine Learning · Computer Science 2026-01-14 Hua Huang , Tianshi Xu , Yuanzhe Xi , Edmond Chow

A significant body of recent research in the field of Learning Analytics has focused on leveraging machine learning approaches for predicting at-risk students in order to initiate timely interventions and thereby elevate retention and…

Machine Learning · Computer Science 2023-06-26 Teo Susnjak

Due to their flexibility and superior performance, machine learning models frequently complement and outperform traditional statistical survival models. However, their widespread adoption is hindered by a lack of user-friendly tools to…

Normative and task-driven theories offer powerful top-down explanations for biological systems, yet the goals of quantitatively arbitrating between competing theories, and utilizing them as inductive biases to improve data-driven fits of…

Artificial Intelligence · Computer Science 2025-09-30 Bahti Zakirov , Gašper Tkačik

The means by which cortical neural networks are able to efficiently solve inference problems remains an open question in computational neuroscience. Recently, abstract models of Bayesian computation in neural circuits have been proposed,…

Neurons and Cognition · Quantitative Biology 2015-02-24 Dimitri Probst , Mihai A. Petrovici , Ilja Bytschok , Johannes Bill , Dejan Pecevski , Johannes Schemmel , Karlheinz Meier

Predictive coding is a unifying framework for understanding perception, action and neocortical organization. In predictive coding, different areas of the neocortex implement a hierarchical generative model of the world that is learned from…

Neurons and Cognition · Quantitative Biology 2023-05-22 Linxing Preston Jiang , Rajesh P. N. Rao

How perception and reasoning arise from neuronal network activity is poorly understood. This is reflected in the fundamental limitations of connectionist artificial intelligence, typified by deep neural networks trained via gradient-based…

Artificial Intelligence · Computer Science 2020-02-27 Paul J. Blazek , Milo M. Lin

The computational burden of probabilistic inference remains a hurdle for applying probabilistic programming languages to practical problems of interest. In this work, we provide a semantic and algorithmic foundation for efficient exact…

Programming Languages · Computer Science 2019-07-02 Steven Holtzen , Todd Millstein , Guy Van den Broeck

Predictive coding (PC) networks are a biologically interesting class of neural networks. Their layered hierarchy mimics the reciprocal connectivity pattern observed in the mammalian cortex, and they can be trained using local learning rules…

Neural and Evolutionary Computing · Computer Science 2019-10-29 Jeff Orchard , Wei Sun

Probabilistic programming frameworks are powerful tools for statistical modelling and inference. They are not immediately generalisable to phylogenetic problems due to the particular computational properties of the phylogenetic tree object.…

Populations and Evolution · Quantitative Biology 2022-11-11 Christiaan Swanepoel , Mathieu Fourment , Xiang Ji , Hassan Nasif , Marc A Suchard , Frederick A Matsen , Alexei Drummond
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