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The worst-case fastest known algorithm for the Set Cover problem on universes with $n$ elements still essentially is the simple $O^*(2^n)$-time dynamic programming algorithm, and no non-trivial consequences of an $O^*(1.01^n)$-time…

Data Structures and Algorithms · Computer Science 2016-08-12 Jesper Nederlof

A $\lambda$-cover of a string $S$ is a set of strings $\{C_i\}_1^\lambda$ such that every index in $S$ is contained in an occurrence of at least one string $C_i$. The existence of a $1$-cover defines a well-known class of quasi-periodic…

Data Structures and Algorithms · Computer Science 2024-05-21 Itai Boneh , Shay Golan , Arseny Shur

We generalize Karp-Rabin string matching to handle multiple patterns in $\mathcal{O}(n \log n + m)$ time and $\mathcal{O}(s)$ space, where $n$ is the length of the text and $m$ is the total length of the $s$ patterns, returning correct…

Data Structures and Algorithms · Computer Science 2015-09-11 Johannes Fischer , Travis Gagie , Paweł Gawrychowski , Tomasz Kociumaka

The Karp-Rabin fingerprint of a string is a type of hash value that due to its strong properties has been used in many string algorithms. In this paper we show how to construct a data structure for a string $S$ of size $N$ compressed by a…

Data Structures and Algorithms · Computer Science 2013-05-17 Philip Bille , Patrick Hagge Cording , Inge Li Gørtz , Benjamin Sach , Hjalte Wedel Vildhøj , Søren Vind

Let $\mathcal{D}$ be a collection of $D$ documents, which are strings over an alphabet of size $\sigma$, of total length $n$. We describe a data structure that uses linear space and and reports $k$ most relevant documents that contain a…

Data Structures and Algorithms · Computer Science 2013-08-02 Gonzalo Navarro , Yakov Nekrich

We present an algorithm that computes a shortest non-contractible and a shortest non-separating cycle on an orientable combinatorial surface of bounded genus in O(n \log n) time, where n denotes the complexity of the surface. This solves a…

Computational Geometry · Computer Science 2007-05-23 Martin Kutz

Suppose that we are given a string $s$ of length $n$ over an alphabet $\{0,1,\ldots,n^{O(1)}\}$ and $\delta$ is the string complexity of $s$, a known compression measure. We describe an index on $s$ with $O(\delta\log\frac{n}{\delta})$…

Data Structures and Algorithms · Computer Science 2026-04-15 Dmitry Kosolobov

In this paper we present new data structures for two extensively studied variants of the orthogonal range searching problem. First, we describe a data structure that supports two-dimensional orthogonal range minima queries in $O(n)$ space…

Data Structures and Algorithms · Computer Science 2020-07-23 Yakov Nekrich

In this paper we present a simple linear-time algorithm constructing a context-free grammar of size O(g log(N/g)) for the input string, where N is the size of the input string and g the size of the optimal grammar generating this string.…

Data Structures and Algorithms · Computer Science 2013-11-08 Artur Jeż

Covers being one of the most popular form of regularities in strings, have drawn much attention over time. In this paper, we focus on the problem of linear time inference of strings from cover arrays using the least sized alphabet possible.…

Data Structures and Algorithms · Computer Science 2011-08-30 Tanaeem M. Moosa , Sumaiya Nazeen , M. Sohel Rahman , Rezwana Reaz

Palindromes are important objects in strings which have been extensively studied from combinatorial, algorithmic, and bioinformatics points of views. It is known that the length of the longest palindromic substrings (LPSs) of a given string…

Data Structures and Algorithms · Computer Science 2021-01-11 Mitsuru Funakoshi , Yuto Nakashima , Shunsuke Inenaga , Hideo Bannai , Masayuki Takeda

Bille and G{\o}rtz (2011) recently introduced the problem of substring range counting, for which we are asked to store compactly a string $S$ of $n$ characters with integer labels in ([0, u]), such that later, given an interval ([a, b]) and…

Data Structures and Algorithms · Computer Science 2012-02-16 Travis Gagie , Paweł Gawrychowski

A factor $u$ of a word $w$ is a cover of $w$ if every position in $w$ lies within some occurrence of $u$ in $w$. A word $w$ covered by $u$ thus generalizes the idea of a repetition, that is, a word composed of exact concatenations of $u$.…

Data Structures and Algorithms · Computer Science 2014-01-03 Tomasz Kociumaka , Jakub Radoszewski , Wojciech Rytter , Solon P. Pissis , Tomasz Waleń

Given a string $T$ with length $n$ whose characters are drawn from an ordered alphabet of size $\sigma$, its longest Lyndon subsequence is a longest subsequence of $T$ that is a Lyndon word. We propose algorithms for finding such a…

Data Structures and Algorithms · Computer Science 2022-01-19 Hideo Bannai , Tomohiro I , Tomasz Kociumaka , Dominik Köppl , Simon J. Puglisi

A seed in a word is a relaxed version of a period in which the occurrences of the repeating subword may overlap. We show a linear-time algorithm computing a linear-size representation of all the seeds of a word (the number of seeds might be…

Data Structures and Algorithms · Computer Science 2019-03-15 Tomasz Kociumaka , Marcin Kubica , Jakub Radoszewski , Wojciech Rytter , Tomasz Walen

A Straight-Line Program (SLP) $G$ for a string $T$ is a context-free grammar (CFG) that derives $T$ only, which can be considered as a compressed representation of $T$. In this paper, we show how to encode $G$ in $n \lceil \lg N \rceil + (n…

Data Structures and Algorithms · Computer Science 2026-01-09 Akito Takasaka , Tomohiro I

We revisit the classic border tree data structure [Gu, Farach, Beigel, SODA 1994] that answers the following prefix-suffix queries on a string $T$ of length $n$ over an integer alphabet $\Sigma=[0,\sigma)$: for any $i,j \in [0,n)$ return…

Data Structures and Algorithms · Computer Science 2024-11-07 Solon P. Pissis

A $c$-short program for a string $x$ is a description of $x$ of length at most $C(x) + c$, where $C(x)$ is the Kolmogorov complexity of $x$. We show that there exists a randomized algorithm that constructs a list of $n$ elements that…

Computational Complexity · Computer Science 2015-01-21 Bruno Bauwens , Marius Zimand

Given strings $P$ and $Q$ the (exact) string matching problem is to find all positions of substrings in $Q$ matching $P$. The classical Knuth-Morris-Pratt algorithm [SIAM J. Comput., 1977] solves the string matching problem in linear time…

Data Structures and Algorithms · Computer Science 2010-09-08 Philip Bille

It is shown that every tree of size $n$ over a fixed set of $\sigma$ different ranked symbols can be decomposed (in linear time as well as in logspace) into $O\big(\frac{n}{\log_\sigma n}\big) = O\big(\frac{n \log \sigma}{\log n}\big)$ many…

Data Structures and Algorithms · Computer Science 2015-09-22 Moses Ganardi , Danny Hucke , Artur Jez , Markus Lohrey , Eric Noeth