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Computing the LZ factorization (or LZ77 parsing) of a string is a computational bottleneck in many diverse applications, including data compression, text indexing, and pattern discovery. We describe new linear time LZ factorization…

Data Structures and Algorithms · Computer Science 2020-12-11 Juha Kärkkäinen , Dominik Kempa , Simon J. Puglisi

Given a string $T$ of length $n$, a substring $u = T[i..j]$ of $T$ is called a shortest unique substring (SUS) for an interval $[s,t]$ if (a) $u$ occurs exactly once in $T$, (b) $u$ contains the interval $[s,t]$ (i.e. $i \leq s \leq t \leq…

Data Structures and Algorithms · Computer Science 2020-09-15 Takuya Mieno , Dominik Köppl , Yuto Nakashima , Shunsuke Inenaga , Hideo Bannai , Masayuki Takeda

The convolution between a text string $S$ of length $N$ and a pattern string $P$ of length $m$ can be computed in $O(N \log m)$ time by FFT. It is known that various types of approximate string matching problems are reducible to…

Data Structures and Algorithms · Computer Science 2013-03-19 Toshiya Tanaka , Tomohiro I , Shunsuke Inenaga , Hideo Bannai , Masayuki Takeda

The Binary Jumbled String Matching problem is defined as: Given a string $s$ over $\{a,b\}$ of length $n$ and a query $(x,y)$, with $x,y$ non-negative integers, decide whether $s$ has a substring $t$ with exactly $x$ $a$'s and $y$ $b$'s.…

Data Structures and Algorithms · Computer Science 2013-06-03 Golnaz Badkobeh , Gabriele Fici , Steve Kroon , Zsuzsanna Lipták

A string $w$ is called a minimal absent word (MAW) for another string $T$ if $w$ does not occur (as a substring) in $T$ and any proper substring of $w$ occurs in $T$. State-of-the-art data structures for reporting the set $\mathsf{MAW}(T)$…

Data Structures and Algorithms · Computer Science 2022-04-18 Tooru Akagi , Kouta Okabe , Takuya Mieno , Yuto Nakashima , Shunsuke Inenaga

The notion of $12$-representable graphs was introduced as a variant of a well-known class of word-representable graphs. Recently, these graphs were shown to be equivalent to the complements of simple-triangle graphs. This indicates that a…

Discrete Mathematics · Computer Science 2023-04-18 Asahi Takaoka

We give a sublinear quantum algorithm for the longest common substring (LCS) problem on the run-length encoded (RLE) inputs, under the assumption that the prefix-sums of the runs are given. Our algorithm costs $\tilde{O}(n^{5/6})\cdot…

Quantum Physics · Physics 2023-10-03 Tzu-Ching Lee , Han-Hsuan Lin

Given two strings $S$ and $P$, the Episode Matching problem is to find the shortest substring of $S$ that contains $P$ as a subsequence. The best known upper bound for this problem is $\tilde O(nm)$ by Das et al. (1997) , where $n,m$ are…

Data Structures and Algorithms · Computer Science 2024-02-15 Philip Bille , Inge Li Gørtz , Shay Mozes , Teresa Anna Steiner , Oren Weimann

We give an $O(n \log \log n)$ time algorithm for computing the minimum cut (or equivalently, the shortest cycle) of a weighted directed planar graph. This improves the previous fastest $O(n\log^3 n)$ solution. Interestingly, while in…

Data Structures and Algorithms · Computer Science 2016-11-15 Shay Mozes , Cyril Nikolaev , Yahav Nussbaum , Oren Weimann

The cornerstone of any algorithm computing all repetitions in a string of length n in O(n) time is the fact that the number of runs (or maximal repetitions) is O(n). We give a simple proof of this result. As a consequence of our approach,…

Data Structures and Algorithms · Computer Science 2008-02-21 Maxime Crochemore , Lucian Ilie

Let $G$ be an unlabeled planar and simple $n$-vertex graph. Unlabeled graphs are graphs where the label-information is either not given or lost during the construction of data-structures. We present a succinct encoding of $G$ that provides…

Data Structures and Algorithms · Computer Science 2024-01-18 Frank Kammer , Johannes Meintrup

We present efficient data structures for submatrix maximum queries in Monge matrices and Monge partial matrices. For $n\times n$ Monge matrices, we give a data structure that requires O(n) space and answers submatrix maximum queries in…

Data Structures and Algorithms · Computer Science 2017-10-13 Pawel Gawrychowski , Shay Mozes , Oren Weimann

Many problems in Computer Science can be abstracted to the following question: given a set of objects and rules respectively, which new objects can be produced? In the paper, we consider a succinct version of the question: given a set of…

Data Structures and Algorithms · Computer Science 2012-01-04 Tian-Ming Bu , Chen Yuan , Peng Zhang

Computation on compressed strings is one of the key approaches to processing massive data sets. We consider local subsequence recognition problems on strings compressed by straight-line programs (SLP), which is closely related to…

Data Structures and Algorithms · Computer Science 2011-11-10 Alexander Tiskin

In this paper, we consider the ``Shortest Superstring Problem''(SSP) or the ``Shortest Common Superstring Problem''(SCS). The problem is as follows. For a positive integer $n$, a sequence of n strings $S=(s^1,\dots,s^n)$ is given. We should…

Quantum Physics · Physics 2021-12-28 Kamil Khadiev , Carlos Manuel Bosch Machado

Let $\mathcal{P}$ be a set of $h$ pairwise-disjoint polygonal obstacles with a total of $n$ vertices in the plane. We consider the problem of building a data structure that can quickly compute an $L_1$ shortest obstacle-avoiding path…

Computational Geometry · Computer Science 2014-03-17 Danny Z. Chen , Rajasekhar Inkulu , Haitao Wang

We introduce data structures answering queries concerning the occurrences of patterns from a given dictionary $\mathcal{D}$ in fragments of a given string $T$ of length $n$. The dictionary is internal in the sense that each pattern in…

Data Structures and Algorithms · Computer Science 2019-09-26 Panagiotis Charalampopoulos , Tomasz Kociumaka , Manal Mohamed , Jakub Radoszewski , Wojciech Rytter , Tomasz Waleń

The use of realistic input models has gained popularity in the theory community. Assuming a realistic input model often precludes complicated hypothetical inputs, and the analysis yields bounds that better reflect the behaviour of…

Computational Geometry · Computer Science 2022-11-15 Joachim Gudmundsson , Zijin Huang , Sampson Wong

We consider the $Parameterized$ $Pattern$ $Matching$ problem, where a pattern $P$ matches some location in a text $\mathsf{T}$ iff there is a one-to-one correspondence between the alphabet symbols of the pattern to those of the text. More…

Data Structures and Algorithms · Computer Science 2016-04-07 Arnab Ganguly , Rahul Shah , Sharma V. Thankachan

We give efficient algorithms for ranking Lyndon words of length $n$ over an alphabet of size $\sigma$. The rank of a Lyndon word is its position in the sequence of lexicographically ordered Lyndon words of the same length. The outputs are…

Data Structures and Algorithms · Computer Science 2023-12-13 Tomasz Kociumaka , Jakub Radoszewski , Wojciech Rytter
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