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Referring Expression Comprehension (REC) is a crucial cross-modal task that objectively evaluates the capabilities of language understanding, image comprehension, and language-to-image grounding. Consequently, it serves as an ideal testing…

Computer Vision and Pattern Recognition · Computer Science 2025-01-14 Junzhuo Liu , Xuzheng Yang , Weiwei Li , Peng Wang

Chemical representation learning has gained increasing interest due to the limited availability of supervised data in fields such as drug and materials design. This interest particularly extends to chemical language representation learning,…

Chemical Physics · Physics 2024-08-06 Jun-Hyung Park , Yeachan Kim , Mingyu Lee , Hyuntae Park , SangKeun Lee

Recently, artificial intelligence for drug discovery has raised increasing interest in both machine learning and chemistry domains. The fundamental building block for drug discovery is molecule geometry and thus, the molecule's geometrical…

Machine Learning · Computer Science 2023-12-07 Weitao Du , Jiujiu Chen , Xuecang Zhang , Zhiming Ma , Shengchao Liu

Molecular representation learning is pivotal in predicting molecular properties and advancing drug design. Traditional methodologies, which predominantly rely on homogeneous graph encoding, are limited by their inability to integrate…

Machine Learning · Computer Science 2025-03-24 Mukun Chen , Jia Wu , Shirui Pan , Fu Lin , Bo Du , Xiuwen Gong , Wenbin Hu

Most existing methods in vision language pre-training rely on object-centric features extracted through object detection and make fine-grained alignments between the extracted features and texts. It is challenging for these methods to learn…

Computation and Language · Computer Science 2022-06-02 Yan Zeng , Xinsong Zhang , Hang Li

Vision-Language Models (VLMs), such as CLIP, exhibit strong image-text comprehension abilities, facilitating advances in several downstream tasks such as zero-shot image classification, image-text retrieval, and text-to-image generation.…

Computer Vision and Pattern Recognition · Computer Science 2024-04-26 Le Zhang , Rabiul Awal , Aishwarya Agrawal

Multi-task learning (MTL) for dense prediction has shown promising results but still faces challenges in balancing shared representations with task-specific specialization. In this paper, we introduce a novel Fine-Grained Mixture of Experts…

Computer Vision and Pattern Recognition · Computer Science 2025-07-28 Yangyang Xu , Xi Ye , Duo Su

Accurate and efficient prediction of the molecular properties of drugs is one of the fundamental problems in drug research and development. Recent advancements in representation learning have been shown to greatly improve the performance of…

Biomolecules · Quantitative Biology 2022-06-17 Hui Liu , Yibiao Huang , Xuejun Liu , Lei Deng

While alignment of texts on the sentential level is often seen as being too coarse, and word alignment as being too fine-grained, bi- or multilingual texts which are aligned on a level in-between are a useful resource for many purposes.…

Computation and Language · Computer Science 2007-05-23 Lea Cyrus , Hendrik Feddes

In recent years, the use of multi-modal pre-trained Transformers has led to significant advancements in visually-rich document understanding. However, existing models have mainly focused on features such as text and vision while neglecting…

Computation and Language · Computer Science 2023-08-16 Qiwei Li , Zuchao Li , Xiantao Cai , Bo Du , Hai Zhao

The problem of molecular generation has received significant attention recently. Existing methods are typically based on deep neural networks and require training on large datasets with tens of thousands of samples. In practice, however,…

Machine Learning · Computer Science 2022-03-16 Minghao Guo , Veronika Thost , Beichen Li , Payel Das , Jie Chen , Wojciech Matusik

Video-text retrieval has seen significant advancements, yet the ability of models to discern subtle differences in captions still requires verification. In this paper, we introduce a new approach for fine-grained evaluation. Our approach…

Computer Vision and Pattern Recognition · Computer Science 2024-10-18 Aozhu Chen , Hazel Doughty , Xirong Li , Cees G. M. Snoek

Textual graphs are ubiquitous in real-world applications, featuring rich text information with complex relationships, which enables advanced research across various fields. Textual graph representation learning aims to generate…

Machine Learning · Computer Science 2024-08-22 Wenbin Hu , Huihao Jing , Qi Hu , Haoran Li , Yangqiu Song

Understanding and designing biomolecules, such as proteins and small molecules, is central to advancing drug discovery, synthetic biology and enzyme engineering. Recent breakthroughs in artificial intelligence have revolutionized…

Computation and Language · Computer Science 2025-07-28 Xiang Zhuang , Keyan Ding , Tianwen Lyu , Yinuo Jiang , Xiaotong Li , Zhuoyi Xiang , Zeyuan Wang , Ming Qin , Kehua Feng , Jike Wang , Qiang Zhang , Huajun Chen

Predicting drug side-effects before they occur is a key task in keeping the number of drug-related hospitalizations low and to improve drug discovery processes. Automatic predictors of side-effects generally are not able to process the…

Machine Learning · Statistics 2022-12-01 Pietro Bongini , Elisa Messori , Niccolò Pancino , Monica Bianchini

This paper studies learning the representations of whole graphs in both unsupervised and semi-supervised scenarios. Graph-level representations are critical in a variety of real-world applications such as predicting the properties of…

Machine Learning · Computer Science 2020-01-20 Fan-Yun Sun , Jordan Hoffmann , Vikas Verma , Jian Tang

Multimodal large language models (MLLMs) have shown impressive capabilities, yet they often struggle to effectively capture the fine-grained textual information within images crucial for accurate image translation. This often leads to a…

Computation and Language · Computer Science 2026-04-21 Bo Li , Ningyuan Deng , Tianyu Dong , Shaobo Wang , Shaolin Zhu , Lijie Wen

Frequent and structurally related subgraphs, also known as network motifs, are valuable features of many graph datasets. However, the high computational complexity of identifying motif sets in arbitrary datasets (motif mining) has limited…

Machine Learning · Computer Science 2022-06-08 Carlos Oliver , Dexiong Chen , Vincent Mallet , Pericles Philippopoulos , Karsten Borgwardt

Results in interpretability suggest that large vision and language models learn implicit linear encodings when models are biased by in-context prompting. However, the existence of similar linear representations in more general adaptation…

Machine Learning · Computer Science 2025-12-18 Darrin O' Brien , Dhikshith Gajulapalli , Eric Xia

Large language models have emerged as transformative tools in molecular science, demonstrating remarkable potential in molecular property prediction and de novo molecular design. However, their application to spectroscopy remains notably…

Machine Learning · Computer Science 2026-03-24 Shuaike Shen , Jiaqing Xie , Zhuo Yang , Antong Zhang , Shuzhou Sun , Ben Gao , Tianfan Fu , Biqing Qi , Yuqiang Li
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