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While clustering is ubiquitously used across science and industry, uncertainty in cluster assignments is rarely quantified with rigorous guarantees. We propose a novel conformal inference framework for clustering that returns confidence…

Methodology · Statistics 2026-04-13 YoonHaeng Hur , Anirban Nath , Genevera Allen

Deep clustering, a method for partitioning complex, high-dimensional data using deep neural networks, presents unique evaluation challenges. Traditional clustering validation measures, designed for low-dimensional spaces, are problematic…

Machine Learning · Statistics 2024-03-25 Zeya Wang , Chenglong Ye

Clustering algorithms have significantly improved along with Deep Neural Networks which provide effective representation of data. Existing methods are built upon deep autoencoder and self-training process that leverages the distribution of…

Computer Vision and Pattern Recognition · Computer Science 2021-09-17 Xin Ma , Won Hwa Kim

Agricultural disease management in developing countries such as India, Kenya, and Nigeria faces significant challenges due to limited access to expert plant pathologists, unreliable internet connectivity, and cost constraints that hinder…

Computer Vision and Pattern Recognition · Computer Science 2025-10-28 Mihir Gupta , Pratik Desai , Ross Greer

In data containing heterogeneous subpopulations, classification performance benefits from incorporating the knowledge of cluster structure in the classifier. Previous methods for such combined clustering and classification either 1) are…

Machine Learning · Computer Science 2023-01-04 Shivin Srivastava , Siddharth Bhatia , Lingxiao Huang , Lim Jun Heng , Kenji Kawaguchi , Vaibhav Rajan

Large language models (LLMs) are increasingly applied to scientific research, yet existing evaluations often fail to reflect the fine-grained capabilities required in practice. Most benchmarks are manually curated or domain-generic,…

Clustering is a fundamental machine learning task which has been widely studied in the literature. Classic clustering methods follow the assumption that data are represented as features in a vectorized form through various representation…

Machine Learning · Computer Science 2022-06-16 Sheng Zhou , Hongjia Xu , Zhuonan Zheng , Jiawei Chen , Zhao li , Jiajun Bu , Jia Wu , Xin Wang , Wenwu Zhu , Martin Ester

Clustering algorithms are pivotal in data analysis, enabling the organization of data into meaningful groups. However, individual clustering methods often exhibit inherent limitations and biases, preventing the development of a universal…

Neural and Evolutionary Computing · Computer Science 2024-12-13 H. Jahani , F. Zamio

Determining phenotypes of diseases can have considerable benefits for in-hospital patient care and to drug development. The structure of high dimensional data sets such as electronic health records are often represented through an embedding…

We introduce Deep-CEE (Deep Learning for Galaxy Cluster Extraction and Evaluation), a proof of concept for a novel deep learning technique, applied directly to wide-field colour imaging to search for galaxy clusters, without the need for…

Astrophysics of Galaxies · Physics 2019-11-26 Matthew C. Chan , John P. Stott

Citrus, as one of the most economically important fruit crops globally, suffers severe yield depressions due to various diseases. Accurate disease detection and classification serve as critical prerequisites for implementing targeted…

Computer Vision and Pattern Recognition · Computer Science 2025-07-16 Jun Chen , Yonghua Yu , Weifu Li , Yaohui Chen , Hong Chen

Plant breeders and agricultural researchers can increase crop productivity by identifying desirable features, disease resistance, and nutritional content by analysing the Dry Bean dataset. This study analyses and compares different Support…

Machine Learning · Computer Science 2023-07-18 Anant Mehta , Prajit Sengupta , Divisha Garg , Harpreet Singh , Yosi Shacham Diamand

Crops hold paramount significance as they serve as the primary provider of energy, nutrition, and medicinal benefits for the human population. Plant diseases, however, can negatively affect leaves during agricultural cultivation, resulting…

Image and Video Processing · Electrical Eng. & Systems 2023-11-07 Shashwat Jha , Vishvaditya Luhach , Gauri Shanker Gupta , Beependra Singh

Accurate classification of blood cells plays a key role in improving automated blood analysis for both medical and veterinary applications. This work presents a two-stage deep clustering method for classifying blood cells from…

Quantitative Methods · Quantitative Biology 2025-09-25 Mihaela Macarie-Ancau , Adrian Groza

The development of external evaluation criteria for soft clustering (SC) has received limited attention: existing methods do not provide a general approach to extend comparison measures to SC, and are unable to account for the uncertainty…

Machine Learning · Computer Science 2022-06-22 Andrea Campagner , Davide Ciucci , Thierry Denœux

High-dimensional clustering analysis is a challenging problem in statistics and machine learning, with broad applications such as the analysis of microarray data and RNA-seq data. In this paper, we propose a new clustering procedure called…

Methodology · Statistics 2022-10-31 Tianqi Liu , Yu Lu , Biqing Zhu , Hongyu Zhao

Cluster analysis, or clustering, plays a crucial role across numerous scientific and engineering domains. Despite the wealth of clustering methods proposed over the past decades, each method is typically designed for specific scenarios and…

Methodology · Statistics 2026-01-22 Siyi Wang , Alexandre Leblanc , Paul D. McNicholas

The grade of clear cell renal cell carcinoma (ccRCC) is a critical prognostic factor, making ccRCC nuclei grading a crucial task in RCC pathology analysis. Computer-aided nuclei grading aims to improve pathologists' work efficiency while…

Image and Video Processing · Electrical Eng. & Systems 2021-06-22 Zeyu Gao , Jiangbo Shi , Xianli Zhang , Yang Li , Haichuan Zhang , Jialun Wu , Chunbao Wang , Deyu Meng , Chen Li

Weakly Supervised Semantic Segmentation (WSSS) with image-level labels has gained attention for its cost-effectiveness. Most existing methods emphasize inter-class separation, often neglecting the shared semantics among related categories…

Computer Vision and Pattern Recognition · Computer Science 2025-09-03 Wangyu Wu , Zhenhong Chen , Xiaowen Ma , Wenqiao Zhang , Xianglin Qiu , Siqi Song , Xiaowei Huang , Fei Ma , Jimin Xiao

Single-cell RNA sequencing (scRNA-seq) reveals cell heterogeneity, with cell clustering playing a key role in identifying cell types and marker genes. Recent advances, especially graph neural networks (GNNs)-based methods, have…

Genomics · Quantitative Biology 2025-10-03 Ping Xu , Zhiyuan Ning , Pengjiang Li , Wenhao Liu , Pengyang Wang , Jiaxu Cui , Yuanchun Zhou , Pengfei Wang