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Spatial variable genes (SVGs) reveal critical information about tissue architecture, cellular interactions, and disease microenvironments. As spatial transcriptomics (ST) technologies proliferate, accurately identifying SVGs across diverse…

Applications · Statistics 2025-10-21 Jiawen Chen , Jinwei Zhang , Dongshen Peng , Yutong Song , Aitong Ruan , Yun Li , Didong Li

Spatial Transcriptomics (ST) profiles thousands of gene expression values at discrete spots with precise coordinates on tissue sections, preserving spatial context essential for clinical and pathological studies. With rising sequencing…

Computer Vision and Pattern Recognition · Computer Science 2026-03-24 Yishun Zhu , Jiaxin Qi , Jian Wang , Yuhua Zheng , Jianqiang Huang

Visual graphics, such as plots, charts, and figures, are widely used to communicate statistical conclusions. Extracting information directly from such visualizations is a key sub-problem for effective search through scientific corpora,…

Computer Vision and Pattern Recognition · Computer Science 2021-12-08 Dale Decatur , Sanjay Krishnan

The dominant paradigm in computational materials discovery relies on heavily parameterized deep architectures, including message-passing graph networks and equivariant models, that require millions of DFT-labeled training structures and…

Materials Science · Physics 2026-05-19 Pranoy Ray , Surya R. Kalidindi

Recently, biclustering is one of the hot topics in bioinformatics and takes the attention of authors from several different disciplines. Hence, many different methodologies from a variety of disciplines are proposed as a solution to the…

Human-Computer Interaction · Computer Science 2021-11-26 Melih Sozdinler

Brushing and linking is widely used for visual analytics in desktop environments. However, using this approach to link many data items between situated (e.g., a virtual screen with data) and embedded views (e.g., highlighted objects in the…

Human-Computer Interaction · Computer Science 2024-06-12 Nina Doerr , Benjamin Lee , Katarina Baricova , Dieter Schmalstieg , Michael Sedlmair

Comprehensively evaluating and comparing researchers' academic performance is complicated due to the intrinsic complexity of scholarly data. Different scholarly evaluation tasks often require the publication and citation data to be…

Graphics · Computer Science 2022-03-25 Zhichun Guo , Jun Tao , Siming Chen , Nitesh V. Chawla , Chaoli Wang

Scatterplots are one of the simplest and most commonly-used visualizations for understanding quantitative, multidimensional data. However, since scatterplots only depict two attributes at a time, analysts often need to manually generate and…

Human-Computer Interaction · Computer Science 2019-07-30 Doris Jung-Lin Lee , Jaewoo Kim , Renxuan Wang , Aditya Parameswaran

Astronomical researchers often think of analysis and visualization as separate tasks. In the case of high-dimensional data sets, though, interactive exploratory data visualization can give far more insight than an approach where data…

Instrumentation and Methods for Astrophysics · Physics 2015-06-05 Alyssa A. Goodman

With the wide usage of data visualizations, a huge number of Scalable Vector Graphic (SVG)-based visualizations have been created and shared online. Accordingly, there has been an increasing interest in exploring how to retrieve…

Human-Computer Interaction · Computer Science 2022-02-15 Haotian Li , Yong Wang , Aoyu Wu , Huan Wei , Huamin Qu

For an ensemble of data points in a multi-parameter space, we present a visual analytics technique to select a representative distribution of parameter values, and analyse how representative this distribution is in all ensemble members. A…

Human-Computer Interaction · Computer Science 2020-07-31 Alexander Kumpf , Josef Stumpfegger , Patrick Fabian Härtl , Rüdiger Westermann

Spatial transcriptomics has revolutionized tissue analysis by simultaneously mapping gene expression, spatial topography, and histological context across consecutive tissue sections, enabling systematic investigation of spatial…

Applications · Statistics 2025-10-24 Meng Zhou , Shuangge Ma , Mengyun Wu

Epidemiology characterizes the influence of causes to disease and health conditions of defined populations. Cohort studies are population-based studies involving usually large numbers of randomly selected individuals and comprising numerous…

Computer Vision and Pattern Recognition · Computer Science 2015-01-19 Bernhard Preim , Paul Klemm , Helwig Hauser , Katrin Hegenscheid , Steffen Oeltze , Klaus Toennies , Henry Völzke

Tabular visualization techniques integrate visual representations with tabular data to avoid additional cognitive load caused by splitting users' attention. However, most of the existing studies focus on simple flat tables instead of…

Human-Computer Interaction · Computer Science 2022-08-12 Guozheng Li , Runfei Li , Zicheng Wang , Chi Harold Liu , Min Lu , Guoren Wang

Spatial Transcriptomics is a groundbreaking technology that integrates histology images with spatially resolved gene expression profiles. Among the various Spatial Transcriptomics techniques available, Visium has emerged as the most widely…

Computer Vision and Pattern Recognition · Computer Science 2025-09-05 Daniela Ruiz , Paula Cárdenas , Leonardo Manrique , Daniela Vega , Gabriel M. Mejia , Pablo Arbeláez

In this position paper, we frame the field of Visual Musicology by providing an overview of well-established musicological sub-domains and their corresponding analytic and visualization tasks. To foster collaborative, interdisciplinary…

Human-Computer Interaction · Computer Science 2019-08-29 Matthias Miller , Hanna Schäfer , Matthias Kraus , Marc Leman , Daniel Keim , Mennatallah El-Assady

Identifying trendline visualizations with desired patterns is a common and fundamental data exploration task. Existing visual analytics tools offer limited flexibility and expressiveness for such tasks, especially when the pattern of…

Databases · Computer Science 2020-01-31 Tarique Siddiqui , Zesheng Wang , Paul Luh , Karrie Karahalios , Aditya Parameswaran

3D Gaussian Splatting has recently emerged as an efficient solution for high-quality and real-time novel view synthesis. However, its capability for accurate surface reconstruction remains underexplored. Due to the discrete and unstructured…

Computer Vision and Pattern Recognition · Computer Science 2025-11-27 Qing Li , Huifang Feng , Xun Gong , Yu-Shen Liu

Most data-driven models for medical image analysis rely on universal augmentations to improve accuracy. Experimental evidence has confirmed their effectiveness, but the unclear mechanism underlying them poses a barrier to the widespread…

Computer Vision and Pattern Recognition · Computer Science 2025-03-27 Yiqin Zhang , Qingkui Chen , Chen Huang , Zhengjie Zhang , Meiling Chen , Zhibing Fu

We present a novel method for characterizing the microstructure of a material from volumetric datasets such as 3D image data from computed tomography (CT). The method is based on a new statistical model for the distribution of voxel…

Materials Science · Physics 2021-01-06 Elise Otterlei Brenne , Vedrana Andersen Dahl , Peter Stanley Jørgensen
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