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Spatial transcriptomics methods capture cellular measurements such as gene expression and cell types at specific locations in a cell, helping provide a localized picture of tissue health. Traditional visualization techniques superimpose the…

Quantitative Methods · Quantitative Biology 2024-10-16 Siyuan Zhao , G. Elisabeta Marai

One of the most useful techniques to help visual data analysis systems is interactive filtering (brushing). However, visualization techniques often suffer from overlap of graphical items and multiple attributes complexity, making visual…

Graphics · Computer Science 2015-07-07 Jose Rodrigues , Luciana Romani , Agma Traina , Caetano Traina

Pattern extraction algorithms are enabling insights into the ever-growing amount of today's datasets by translating reoccurring data properties into compact representations. Yet, a practical problem arises: With increasing data volumes and…

Information Retrieval · Computer Science 2018-07-05 Michael Behrisch , Robert Krueger , Fritz Lekschas , Tobias Schreck , Nils Gehlenborg , Hanspeter Pfister

Prior work on perceptual effectiveness has decomposed visualizations into smaller common units (e.g., channels such as angle, position, and length) to establish rankings. While useful, these decompositions lack the computational structure…

Human-Computer Interaction · Computer Science 2026-04-03 Sheng Long , Remco Chang , Eugene Wu , Alex Kale , Matthew Kay

We propose different methods for alternative representation and visual augmentation of sheet music that help users gain an overview of general structure, repeating patterns, and the similarity of segments. To this end, we explored mapping…

Human-Computer Interaction · Computer Science 2023-08-14 Frank Heyen , Quynh Quang Ngo , Michael Sedlmair

Comparison is a core task in visual analysis. Although there are numerous guidelines to help users design effective visualizations to aid known comparison tasks, there are few techniques available when users want to make ad hoc comparisons…

Human-Computer Interaction · Computer Science 2022-02-17 Eugene Wu

Machine learning for data-driven diagnosis has been actively studied in medicine to provide better healthcare. Supporting analysis of a patient cohort similar to a patient under treatment is a key task for clinicians to make decisions with…

Medical Physics · Physics 2020-03-25 Rongchen Guo , Takanori Fujiwara , Yiran Li , Kelly M. Lima , Soman Sen , Nam K. Tran , Kwan-Liu Ma

There is a growing trend of applying machine learning methods to medical datasets in order to predict patients' future status. Although some of these methods achieve high performance, challenges still exist in comparing and evaluating…

Medical Physics · Physics 2020-03-25 Yiran Li , Takanori Fujiwara , Yong K. Choi , Katherine K. Kim , Kwan-Liu Ma

Interactive visualizations are crucial in ad hoc data exploration and analysis. However, with the growing number of massive datasets, generating visualizations in interactive timescales is increasingly challenging. One approach for…

Databases · Computer Science 2017-01-25 Yongjoo Park , Michael Cafarella , Barzan Mozafari

We present a visual analytics system for exploring group differences in tensor fields with respect to all six degrees of freedom that are inherent in symmetric second-order tensors. Our framework closely integrates quantitative analysis,…

Rapidly growing data sizes of scientific simulations pose significant challenges for interactive visualization and analysis techniques. In this work, we propose a compact probabilistic representation to interactively visualize large…

Graphics · Computer Science 2020-10-16 Tobias Rapp , Christoph Peters , Carsten Dachsbacher

This paper presents a novel application of compositional data analysis methods in the context of color image processing. A vector decomposition method is proposed to reveal compositional components of any vector with positive components…

Quantitative Methods · Quantitative Biology 2018-06-12 Omer Faruk Gulban

Objective: Visual cohort analysis utilizing electronic health record data has become an important tool in clinical assessment of patient outcomes. In this paper, we introduce Composer, a visual analysis tool for orthopedic surgeons to…

Human-Computer Interaction · Computer Science 2019-03-20 Jennifer Rogers , Nicholas Spina , Ashley Neese , Rachel Hess , Darrel Brodke , Alexander Lex

This paper proposes a visual analytics framework that addresses the complex user interactions required through a command-line interface to run analyses in distributed data analysis systems. The visual analytics framework facilitates the…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-11-12 Abdullah-Al-Raihan Nayeem , Mohammed Elshambakey , Todd Dobbs , Huikyo Lee , Daniel Crichton , Yimin Zhu , Chanachok Chokwitthaya , William J. Tolone , Isaac Cho

Traditional methods for the analysis of compositional data consider the log-ratios between all different pairs of variables with equal weight, typically in the form of aggregated contributions. This is not meaningful in contexts where it is…

Methodology · Statistics 2022-01-27 Christopher Rieser , Peter Filzmoser

Comparison is a core task in visual analysis. Although there are numerous guidelines to help users design effective visualizations to aid known comparison tasks, there are few formalisms that define the semantics of comparison operations in…

Databases · Computer Science 2022-05-04 Eugene Wu

Manually investigating sheet music collections is challenging for music analysts due to the magnitude and complexity of underlying features, structures, and contextual information. However, applying sophisticated algorithmic methods would…

Human-Computer Interaction · Computer Science 2022-03-25 Matthias Miller , Julius Rauscher , Daniel A. Keim , Mennatallah El-Assady

Visual analytics (VA) is a visually assisted exploratory analysis approach in which knowledge discovery is executed interactively between the user and system in a human-centered manner. The purpose of this study is to develop a method for…

Human-Computer Interaction · Computer Science 2021-07-27 Ryuji Watanabe , Hideaki Ishibashi , Tetsuo Furukawa

We introduce a novel method for overlaying cell type proportion data onto tissue images. This approach preserves spatial context while avoiding visual clutter or excessively obscuring the underlying slide. Our proposed technique involves…

Computer Vision and Pattern Recognition · Computer Science 2024-10-10 Lee Mason , Jonas Almeida

Visual attribute imbalance is a common yet underexplored issue in image classification, significantly impacting model performance and generalization. In this work, we first define the first-level and second-level attributes of images and…

Computer Vision and Pattern Recognition · Computer Science 2025-06-18 Jiayi Chen , Yanbiao Ma , Andi Zhang , Weidong Tang , Wei Dai , Bowei Liu
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