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The delimitation of biological species, i.e., deciding which individuals belong to the same species and whether and how many different species are represented in a data set, is key to the conservation of biodiversity. Much existing work…

Populations and Evolution · Quantitative Biology 2025-12-15 Gabriele d'Angella , Christian Hennig

Monte-Carlo (MC) methods, based on random updates and the trial-and-error principle, are well suited to retrieve particle size distributions from small-angle scattering patterns of dilute solutions of scatterers. The size sensitivity of…

Data Analysis, Statistics and Probability · Physics 2013-03-19 Brian Richard Pauw , Jan-Skov Pedersen , Samuel Tardif , Masaki Takata , Bo Brummersted Iversen

We describe a novel approach to statistical learning from particles tracked while moving in a random environment. The problem consists in inferring properties of the environment from recorded snapshots. We consider here the case of a fluid…

Information Theory · Computer Science 2008-06-09 Michael Chertkov , Lukas Kroc , Massimo Vergassola

A discrete version of the Gumbel (Type I) extreme value distribution has been derived by using the general approach of discretization of a continuous distribution. Important distributional and reliability properties have been explored. It…

Statistics Theory · Mathematics 2014-10-29 Subrata Chakraborty , Dhrubajyoti Chakravarty

A diffusion spider is a strong Markov process with continuous paths taking values on a graph with one vertex and a finite number of edges (of infinite length). An example is Walsh's Brownian spider where the process on each edge behaves as…

Probability · Mathematics 2022-09-26 Jukka Lempa , Ernesto Mordecki , Paavo Salminen

Message-Passing Monte Carlo (MPMC) was recently introduced as a novel low-discrepancy sampling approach leveraging tools from geometric deep learning. While originally designed for generating uniform point sets, we extend this framework to…

Machine Learning · Computer Science 2025-03-28 Nathan Kirk , T. Konstantin Rusch , Jakob Zech , Daniela Rus

Environmental heterogeneity is a determining factor of the structure of biological communities. Thus, understanding the distribution of species along environmental gradients provides assistance to conservation. The goal of this study was to…

Populations and Evolution · Quantitative Biology 2021-05-24 Eliana Celestino da Paixao do Rodrigues dos Santos

This paper proposes a data-driven distributionally robust shortest path (DRSP) model where the distribution of the travel time in the transportation network can only be partially observed through a finite number of samples. Specifically, we…

Optimization and Control · Mathematics 2019-11-19 Zhuolin Wang , Keyou You , Shiji Song , Yuli Zhang

We study the hunting process for a target, in which the hunter tracks the goal by smelling odors it emits. The odor intensity is supposed to decrease with the distance it diffuses. The Monte Carlo experiment is carried out on a…

Statistical Mechanics · Physics 2009-11-10 Shi-Jie Yang

How should dispersal strategies be chosen to increase the likelihood of survival of a species? We obtain the answer for the spatially extended versions of three well-known models of two competing species with unequal diffusivities. Though…

Populations and Evolution · Quantitative Biology 2020-07-08 Tapas Singha , Prasad Perlekar , Mustansir Barma

Run-and-tumble is a common but vital strategy that bacteria employ to explore environment suffused with boundaries, as well as to escape from entrapment. In this study we reveal how this strategy and the resulting dynamical behavior can be…

Soft Condensed Matter · Physics 2025-01-30 Premkumar Leishangthem , Xuan Wang , Junan Chen , Shengqi Yang , Xinliang Xu

We introduce the extremal range, a local statistic for studying the spatial extent of extreme events in random fields on $\mathbb{R}^d$. Conditioned on exceedance of a high threshold at a location $s$, the extremal range at $s$ is the…

Statistics Theory · Mathematics 2024-11-06 Ryan Cotsakis , Elena Di Bernardino , Thomas Opitz

Metapopulation theory for a long time has assumed dispersal to be symmetric, i.e. patches are connected through migrants dispersing bi-directionally without a preferred direction. However, for natural populations symmetry is often broken,…

Populations and Evolution · Quantitative Biology 2011-10-07 David Kleinhans , Per R. Jonsson

We introduce an \verb|R| package, called \verb|MPS|, for computing the probability density function, computing the cumulative distribution function, computing the quantile function, simulating random variables, and estimating the parameters…

Computation · Statistics 2018-09-11 Mahdi Teimouri

Interactions among individuals from the same-species of wild animals are an important component of population dynamics. An interaction can be either static (based on overlap of space use) or dynamic (based on movement). The goal of this…

Applications · Statistics 2025-02-05 Fekadu L. Bayisa , Christopher L. Seals , Hannah J. Leeper , Todd D. Steury , Elvan Ceyhan

In phylogenetics, distances are often used to measure the incongruence between a pair of phylogenetic trees that are reconstructed by different methods or using different regions of genome. Motivated by the maximum parsimony principle in…

Populations and Evolution · Quantitative Biology 2016-07-08 Steven Kelk , Mareike Fischer , Vincent Moulton , Taoyang Wu

This paper presents a distance-based discriminative framework for learning with probability distributions. Instead of using kernel mean embeddings or generalized radial basis kernels, we introduce embeddings based on dissimilarity of…

Machine Learning · Computer Science 2018-11-16 Alain Rakotomamonjy , Abraham Traoré , Maxime Berar , Rémi Flamary , Nicolas Courty

The diameter distribution of a given species of deciduous trees in mature, temperate zone forests is well approximated by a Gamma distribution. Here we give new experimental evidence for this conjecture by analyzing deciduous tree size data…

Populations and Evolution · Quantitative Biology 2023-10-17 Szabolcs Kelemen , Máté Józsa , Tibor Hartel , György Csóka , Zoltán Néda

In this paper we consider a model for the diffusion of a population in a strip-shaped field, where the growth of the species is governed by a Fisher-KPP equation and which is bounded on one side by a road where the species can have a…

Analysis of PDEs · Mathematics 2015-06-30 Andrea Tellini

UK woodlands, forests, and urban treescapes are under threat from invasive species, exacerbated by climate change, trade, and transport. Invasive tree pests debilitate their host and disrupt forest ecosystems, thus it is imperative to…

Populations and Evolution · Quantitative Biology 2025-11-03 Jamie P. McKeown , Laura E. Wadkin , Nick G. Parker , Andrew Golightly , Andrew W. Baggaley