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Designing molecules with optimized properties remains a fundamental challenge due to the intricate relationship between molecular structure and properties. Traditional computational approaches that address the combinatorial number of…

Quantum Physics · Physics 2025-08-25 Francesco Calcagno , Delmar G. A. Cabral , Ivan Rivalta , Victor S. Batista

We study supervised learning algorithms in which a quantum device is used to perform a computational subroutine - either for prediction via probability estimation, or to compute a kernel via estimation of quantum states overlap. We design…

Quantum Physics · Physics 2021-07-07 Ulysse Chabaud , Damian Markham , Adel Sohbi

Recent attempts at introducing rotation invariance or equivariance in 3D deep learning approaches have shown promising results, but these methods still struggle to reach the performances of standard 3D neural networks. In this work we study…

Computer Vision and Pattern Recognition · Computer Science 2020-12-09 Hugues Thomas

Molecular property prediction, crucial for early drug candidate screening and optimization, has seen advancements with deep learning-based methods. While deep learning-based methods have advanced considerably, they often fall short in fully…

Biomolecules · Quantitative Biology 2024-07-01 Taojie Kuang , Yiming Ren , Zhixiang Ren

Representations of the quantum superalgebra U_q[osp(1/2)] and their relations to the basic hypergeometric functions are investigated. We first establish Clebsch-Gordan decomposition for the superalgebra U_q[osp(1/2)] in which the…

Quantum Algebra · Mathematics 2011-11-09 N. Aizawa , R. Chakrabarti , S. S. Naina Mohammed , J. Segar

Predicting the pose of objects from a single image is an important but difficult computer vision problem. Methods that predict a single point estimate do not predict the pose of objects with symmetries well and cannot represent uncertainty.…

Computer Vision and Pattern Recognition · Computer Science 2023-02-28 David M. Klee , Ondrej Biza , Robert Platt , Robin Walters

Obtaining the desired effect of drugs is highly dependent on their molecular geometries. Thus, the current prevailing paradigm focuses on 3D point-cloud atom representations, utilizing graph neural network (GNN) parametrizations, with…

Fixed point lattice actions are designed to have continuum classical properties unaffected by discretization effects and reduced lattice artifacts at the quantum level. They provide a possible way to extract continuum physics with coarser…

High Energy Physics - Lattice · Physics 2024-10-04 Kieran Holland , Andreas Ipp , David I. Müller , Urs Wenger

Machine Learning (ML) techniques are revolutionizing the way to perform efficient materials modeling. Nevertheless, not all the ML approaches allow for the understanding of microscopic mechanisms at play in different phenomena. To address…

Materials Science · Physics 2022-06-22 Udaykumar Gajera , Loriano Storchi , Danila Amoroso , Francesco Delodovici , Silvia Picozzi

The application of language models (LMs) to molecular structure generation using line notations such as SMILES and SELFIES has been well-established in the field of cheminformatics. However, extending these models to generate 3D molecular…

Machine Learning · Computer Science 2024-12-03 Kaiyuan Gao , Yusong Wang , Haoxiang Guan , Zun Wang , Qizhi Pei , John E. Hopcroft , Kun He , Lijun Wu

Molecular property prediction is one of the fastest-growing applications of deep learning with critical real-world impacts. Including 3D molecular structure as input to learned models improves their performance for many molecular tasks.…

Learning representations of molecular structures using deep learning is a fundamental problem in molecular property prediction tasks. Molecules inherently exist in the real world as three-dimensional structures; furthermore, they are not…

Machine Learning · Computer Science 2024-01-22 Daiki Koge , Naoaki Ono , Shigehiko Kanaya

Cryo-electron microscopy (cryo-EM) has emerged as a powerful technique for resolving the three-dimensional structures of macromolecules. A key challenge in cryo-EM is characterizing continuous heterogeneity, where molecules adopt a…

Machine Learning · Statistics 2026-02-20 Roey Yadgar , Roy R. Lederman , Yoel Shkolnisky

Statistical learning methods show great promise in providing an accurate prediction of materials and molecular properties, while minimizing the need for computationally demanding electronic structure calculations. The accuracy and…

Materials Science · Physics 2018-01-24 Andrea Grisafi , David M. Wilkins , Gábor Csányi , Michele Ceriotti

Finding correspondences between 3D shapes is a crucial problem in computer vision and graphics, which is for example relevant for tasks like shape interpolation, pose transfer, or texture transfer. An often neglected but essential property…

Computer Vision and Pattern Recognition · Computer Science 2023-09-12 Viktoria Ehm , Paul Roetzer , Marvin Eisenberger , Maolin Gao , Florian Bernard , Daniel Cremers

An algorithm is developed for efficiently constructing the Lorentz covariant effective three-point vertices of the decay of a particle into two daughter particles in which all the masses and spins of the three particles can be arbitrary.…

High Energy Physics - Phenomenology · Physics 2022-02-02 Seong Youl Choi , Jae Hoon Jeong

We obtain exact, simple and very compact expressions for the linearization coefficients of the products of orthogonal polynomials; both the conventional Clebsch-Gordan-type and the modified version. The expressions are general depending…

Classical Analysis and ODEs · Mathematics 2023-06-09 A. D. Alhaidari

Atomic level qubits in silicon are attractive candidates for large-scale quantum computing, however, their quantum properties and controllability are sensitive to details such as the number of donor atoms comprising a qubit and their…

Mesoscale and Nanoscale Physics · Physics 2020-03-17 Muhammad Usman , Yi Z. Wong , Charles D. Hill , Lloyd C. L. Hollenberg

Biomolecular thermodynamics and spectroscopy depend on relative conformer energies, local curvatures, and collective dipole fluctuations on the potential-energy surface. Conventional molecular mechanics force fields enable large-scale…

This paper considers the problem for finding the $(\delta,\epsilon)$-Goldstein stationary point of Lipschitz continuous objective, which is a rich function class to cover a great number of important applications. We construct a zeroth-order…

Quantum Physics · Physics 2024-10-22 Chengchang Liu , Chaowen Guan , Jianhao He , John C. S. Lui