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The integration and transmission of information in the brain are dependent on the interplay between structural and dynamical properties. Implicit in any pursuit aimed at understanding neural dynamics from appropriate sets of mathematically…

Neurons and Cognition · Quantitative Biology 2020-06-30 Joshua M. Roldan , Sebastian Pardo G. , Vivek Kurien George , Gabriel A. Silva

Accessing the thermodynamic-limit properties of strongly correlated quantum matter requires simulations on very large lattices, a regime that remains challenging for numerical methods, especially in frustrated two-dimensional systems. We…

Strongly Correlated Electrons · Physics 2026-02-04 Luciano Loris Viteritti , Riccardo Rende , Subir Sachdev , Giuseppe Carleo

We employ a convolutional neural network to explore the distinct phases in random spin systems with the aim to understand the specific features that the neural network chooses to identify the phases. With the energy spectrum normalized to…

Disordered Systems and Neural Networks · Physics 2020-07-24 Rubah Kausar , Wen-Jia Rao , Xin Wan

Quantitative studies of cell metabolism are often based on large chemical reaction network models. A steady state approach is suited to analyze phenomena on the timescale of cell growth and circumvents the problem of incomplete experimental…

Molecular Networks · Quantitative Biology 2019-02-20 A. De Martino , D. De Martino , E. Marinari

Autism spectrum disorder (ASD) represents a neurodevelopmental condition characterized by difficulties in expressing emotions and communication, particularly during early childhood. Understanding the affective state of children at an early…

Computer Vision and Pattern Recognition · Computer Science 2026-01-28 Aura Loredana Dan

The brain is a complex system comprising a myriad of interacting elements, posing significant challenges in understanding its structure, function, and dynamics. Network science has emerged as a powerful tool for studying such intricate…

One of the paramount challenges in neuroscience is to understand the dynamics of individual neurons and how they give rise to network dynamics when interconnected. Historically, researchers have resorted to graph theory, statistics, and…

Neurons and Cognition · Quantitative Biology 2019-02-08 Jean-Baptiste Bardin , Gard Spreemann , Kathryn Hess

What makes a network complex, in addition to its size, is the interconnected interactions between elements, disruption of which inevitably results in dysfunction. Likewise, the brain networks' complexity arises from interactions beyond pair…

Neurons and Cognition · Quantitative Biology 2022-04-19 Z. Moradimanesh , R. Khosrowabadi , M. Eshaghi Gordji , G. R. Jafari

Detecting structural change in dynamic network data has wide-ranging applications. Existing approaches typically divide the data into time bins, extract network features within each bin, and then compare these features over time. This…

Machine Learning · Computer Science 2026-03-17 Raphaël Romero , Tijl De Bie , Nick Heard , Alexander Modell

This work maps deep neural networks to classical Ising spin models, allowing them to be described using statistical thermodynamics. The density of states shows that structures emerge in the weights after they have been trained --…

Statistical Mechanics · Physics 2022-09-20 Dusan Stosic , Darko Stosic , Borko Stosic

Constructing a thermodynamic framework for nonequilibrium systems remains a major challenge, as quantities such as temperature and free energy often become ambiguous when inferred solely from steady-state properties. Here we take a…

Phase transitions are ubiquitous across life, yet hard to quantify and describe accurately. In this work, we develop an approach for characterizing generic attributes of phase transitions from very limited observations made deep within…

Statistical Mechanics · Physics 2023-08-30 Lukas Herron , Kinjal Mondal , John S. Schneekloth , Pratyush Tiwary

Autism Spectrum Disorder (ASD) is characterized by an altered phenotype in social interaction and communication. Additionally, autism typically manifests differently in females as opposed to males: a phenomenon that has likely led to…

Neurons and Cognition · Quantitative Biology 2024-05-08 Michelle McCleod , Sean Borneman , Evie Malaia

Identifying thermodynamic signatures of electronic phases, such as superconductivity, is challenging in low-dimensional materials due to strong fluctuations and low probing volume. Spectroscopic methods are often used to identify new bulk…

Superconductivity · Physics 2025-04-15 Xu Chen , Yuanjie Sun , Eugen Hruska , Vivek Dixit , Jinming Yang , Yu He , Yao Wang , Fang Liu

Information-processing systems that coordinate multiple agents and objectives face fundamental thermodynamic constraints. We show that solutions with maximum utility to act as coordination focal points have a much higher selection pressure…

Artificial Intelligence · Computer Science 2025-10-16 Atma Anand

The brain's functional connectivity fluctuates over time instead of remaining steady in a stationary mode even during the resting state. This fluctuation establishes the dynamical functional connectivity that transitions in a non-random…

Neurons and Cognition · Quantitative Biology 2022-03-28 Shikuang Deng , Jingwei Li , B. T. Thomas Yeo , Shi Gu

This paper proposes a novel approach of integrating different neuroimaging techniques to characterize an autistic brain. Different techniques like EEG, fMRI and DTI have traditionally been used to find biomarkers for autism, but there have…

Characterizing the brain dynamics during different cortical states can reveal valuable information about its patterns across various cognitive processes. In particular, studying the differences between awake and sleep stages can shed light…

The dynamics of neural networks is often characterized by collective behavior and quasi-synchronous events, where a large fraction of neurons fire in short time intervals, separated by uncorrelated firing activity. These global temporal…

Disordered Systems and Neural Networks · Physics 2014-10-03 Raffaella Burioni , Mario Casartelli , Matteo di Volo , Roberto Livi , Alessandro Vezzani

Recent developments in network neuroscience have highlighted the importance of developing techniques for analyzing and modeling brain networks. A particularly powerful approach for studying complex neural systems is to formulate generative…

Neurons and Cognition · Quantitative Biology 2022-09-09 Viplove Arora , Enrico Amico , Joaquín Goñi , Mario Ventresca
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