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Transmission risk of air-borne diseases in public transportation systems is a concern. The paper proposes a modified Wells-Riley model for risk analysis in public transportation systems to capture the passenger flow characteristics,…

Populations and Evolution · Quantitative Biology 2020-08-20 Jiali Zhou , Haris N. Koutsopoulos

Increasingly, experimentalists and modellers alike have come to recognise the important role of spatial structure in infection dynamics. Almost invariably, spatial computational models of viral infections - as with in vitro experimental…

Quantitative Methods · Quantitative Biology 2025-04-11 Thomas Williams , James M. McCaw , James M. Osborne

Our study presents an intermediate-level modeling approach that bridges the gap between complex Agent-Based Models (ABMs) and traditional compartmental models for infectious diseases. We introduce "super-agents" to simulate infection spread…

Computers and Society · Computer Science 2024-03-12 Amir Mohammad Esmaieeli Sikaroudi , Alon Efrat , Michael Chertkov

This paper presents a new multi-agent model for simulating malware propagation in device-to-device (D2D) 5G networks. This model allows to understand and analyze mobile malware-spreading dynamics in such highly dynamical networks.…

Networking and Internet Architecture · Computer Science 2022-01-31 Ziyad Benomar , Chaima Ghribi , Elie Cali , Alexander Hinsen , Benedikt Jahnel

We use topological data analysis as a tool to analyze the fit of mathematical models to experimental data. This study is built on data obtained from motion tracking groups of aphids in [Nilsen et al., PLOS One, 2013] and two random walk…

Quantitative Methods · Quantitative Biology 2018-11-13 M. Ulmer , Lori Ziegelmeier , Chad M. Topaz

Oncolytic virotherapy, utilizing genetically modified viruses to combat cancer and trigger anti-cancer immune responses, has garnered significant attention in recent years. In our previous work arXiv:2305.12386, we developed a stochastic…

Populations and Evolution · Quantitative Biology 2026-04-23 David Morselli , Marcello E. Delitala , Adrianne L. Jenner , Federico Frascoli

Understanding the spread of any disease is a highly complex and interdisciplinary exercise as biological, social, geographic, economic, and medical factors may shape the way a disease moves through a population and options for its eventual…

Populations and Evolution · Quantitative Biology 2016-12-14 Aristides Moustakas

Human mobility is a key factor in spatial disease dynamics and related phenomena. In computational models host mobility is typically modelled by diffusion in space or on metapolulation networks. Alternatively, an effective force of…

Physics and Society · Physics 2012-03-07 Vitaly Belik , Theo Geisel , Dirk Brockmann

The increase in the connectivity between hosts in recent times has facilitated the emergence of more aggressive mutant viral strains, making their containment and eradication significantly more challenging compared to the original variants.…

Populations and Evolution · Quantitative Biology 2025-02-27 Javier López-Pedrares , M. Elena Vázquez-Cendón , Alberto P. Muñuzuri

Autonomous 3D acquisition of outdoor environments poses special challenges. Different from indoor scenes, where the room space is delineated by clear boundaries and separations (e.g., walls and furniture), an outdoor environment is spacious…

Robotics · Computer Science 2020-12-24 Pengdi Huang , Liqiang Lin , Kai Xu , Hui Huang

Modeling and simulation of pedestrian behavior is used in applications such as planning large buildings, disaster management, or urban planning. Realistically simulating pedestrian behavior is challenging, due to the complexity of…

Multiagent Systems · Computer Science 2017-09-26 Fatema Tuj Johora , Philipp Kraus , Jörg P. Müller

Tuberculosis (TB) is an airborne disease caused by the bacterium Mycobacterium tuberculosis (M. tb). Prior to the COVID-19 pandemic, TB was the leading cause of death from an infectious agent globally. However, most people exposed to M. tb…

Quantitative Methods · Quantitative Biology 2026-03-02 James W. G. Doran , Christopher F. Rowlatt , Gibin G. Powathil , Ruth Bowness , Christian A. Yates

The COVID-19 pandemic and the implementation of social distancing policies have rapidly changed people's visiting patterns, as reflected in mobility data that tracks mobility traffic using location trackers on cell phones. However, the…

Software Engineering · Computer Science 2024-05-14 Prajindra Sankar Krishnan , Chai Phing Chen , Gamal Alkawsi , Sieh Kiong Tiong , Luiz Fernando Capretz

Understanding human mobility is important for the development of intelligent mobile service robots as it can provide prior knowledge and predictions of human distribution for robot-assisted activities. In this paper, we propose a…

Human-Computer Interaction · Computer Science 2016-06-29 Bo Tang , Chao Jiang , Haibo He , Yi Guo

The coronavirus disease (COVID-19) pandemic has changed our lives and still poses a challenge to science. Numerous studies have contributed to a better understanding of the pandemic. In particular, inhalation of aerosolised pathogens has…

Populations and Evolution · Quantitative Biology 2022-09-02 Simon Rahn , Marion Gödel , Gerta Köster , Gesine Hofinger

This paper deals with the cellular biological network analysis of the tumor-growth model, consisting of multiple spaces and time scales. In this paper, we present a model in graph simulation using ABM for tumor growth. In particular, we…

Multiagent Systems · Computer Science 2019-09-05 Ghazal Tashakor , Remo Suppi

We analyzed agent behavior in complex networks: Barab\'asi-Albert (BA), Erdos-R\'enyi (ER), and Watts-Strogatz (WS) models under the following rules: agents (a) randomly select a destination among adjacent nodes; (b) exclude the most…

Physics and Society · Physics 2024-09-04 Satori Tsuzuki , Daichi Yanagisawa , Eri Itoh , Katsuhiro Nishinari

This paper presents a novel virus propagation model using NetLogo. The model allows agents to move across multiple sites using different routes. Routes can be configured, enabled for mobility and (un)locked down independently. Similarly,…

Multiagent Systems · Computer Science 2021-02-02 Dibakar Das

This study investigates the spatial integration of agent-based models (ABMs) and compartmental models for infectious disease modeling, presenting a novel hybrid approach and examining its implications. ABMs offer detailed insights by…

Populations and Evolution · Quantitative Biology 2025-02-06 Inan Bostanci , Tim Conrad

Motivated by foot-and-mouth disease (FMD) outbreak data from Turkey, we develop a model to estimate disease risk based on a space-time record of outbreaks. The spread of infectious disease in geographical units depends on both transmission…

Applications · Statistics 2021-10-19 Xiaoxiao Li , Matthew Ferrari , Michael J. Tildesley , Murali Haran