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Graph Neural Networks (GNNs) with attention have been successfully applied for learning visual feature matching. However, current methods learn with complete graphs, resulting in a quadratic complexity in the number of features. Motivated…

Computer Vision and Pattern Recognition · Computer Science 2023-03-20 Yan Shi , Jun-Xiong Cai , Yoli Shavit , Tai-Jiang Mu , Wensen Feng , Kai Zhang

One of the most important challenges in the analysis of high-throughput genetic data is the development of efficient computational methods to identify statistically significant Single Nucleotide Polymorphisms (SNPs). Genome-wide association…

Noise suppression in seismic data processing is a crucial research focus for enhancing subsequent imaging and reservoir prediction. Deep learning has shown promise in computer vision and holds significant potential for seismic data…

Geophysics · Physics 2024-08-06 Fei Li , Zhenbin Xia , Dawei Liu , Xiaokai Wang , Wenchao Chen , Juan Chen , Leiming Xu

Clustering has long been a popular unsupervised learning approach to identify groups of similar objects and discover patterns from unlabeled data in many applications. Yet, coming up with meaningful interpretations of the estimated clusters…

Methodology · Statistics 2020-05-26 Minjie Wang , Tianyi Yao , Genevera I. Allen

Augmentation techniques and sampling strategies are crucial in contrastive learning, but in most existing works, augmentation techniques require careful design, and their sampling strategies can only capture a small amount of intrinsic…

Machine Learning · Computer Science 2023-07-28 Yixian Ma , Kun Zhan

Spiking Neural Networks (SNNs) have been recently integrated into Transformer architectures due to their potential to reduce computational demands and to improve power efficiency. Yet, the implementation of the attention mechanism using…

Hardware Architecture · Computer Science 2024-11-12 Zihang Song , Prabodh Katti , Osvaldo Simeone , Bipin Rajendran

Foundation models for single-cell RNA sequencing (scRNA-seq) have shown promising capabilities in capturing gene expression patterns. However, current approaches face critical limitations: they ignore biological prior knowledge encoded in…

Machine Learning · Computer Science 2025-03-04 Mufan Qiu , Xinyu Hu , Fengwei Zhan , Sukwon Yun , Jie Peng , Ruichen Zhang , Bhavya Kailkhura , Jiekun Yang , Tianlong Chen

Clustering is widely used in unsupervised learning method that deals with unlabeled data. Deep clustering has become a popular study area that relates clustering with Deep Neural Network (DNN) architecture. Deep clustering method…

Machine Learning · Computer Science 2020-07-14 Abu Quwsar Ohi , M. F. Mridha , Farisa Benta Safir , Md. Abdul Hamid , Muhammad Mostafa Monowar

In this study, we present the Graph Sub-Graph Network (GSN), a novel hybrid image classification model merging the strengths of Convolutional Neural Networks (CNNs) for feature extraction and Graph Neural Networks (GNNs) for structural…

Computer Vision and Pattern Recognition · Computer Science 2024-10-01 Aryan Singh , Pepijn Van de Ven , Ciarán Eising , Patrick Denny

Spectral Embedding (SE) has often been used to map data points from non-linear manifolds to linear subspaces for the purpose of classification and clustering. Despite significant advantages, the subspace structure of data in the original…

Computer Vision and Pattern Recognition · Computer Science 2023-05-16 Hira Yaseen , Arif Mahmood

Day-ahead generation scheduling is typically conducted by solv-ing security-constrained unit commitment (SCUC) problem. However, with fast-growing of inverter-based resources, grid inertia has been dramatically reduced, compromising the…

Systems and Control · Electrical Eng. & Systems 2026-03-17 Mingjian Tuo , Fan Jiang , Xingpeng Li , Pascal Van Hentenryck

Time-series single-cell RNA-sequencing (scRNA-seq) datasets offer unprecedented insights into the dynamics and heterogeneity of cellular systems. These systems exhibit multiscale collective behaviors driven by intricate intracellular gene…

Quantitative Methods · Quantitative Biology 2025-05-23 Qi Jiang , Lei Zhang , Longquan Li , Lin Wan

The advent of single-cell sequencing opens new avenues for personalized treatment. In this paper, we address a two-level clustering problem of simultaneous subject subgroup discovery (subject level) and cell type detection (cell level) for…

Methodology · Statistics 2021-02-23 Qiuyu Wu , Xiangyu Luo

Deep multi-view subspace clustering (DMVSC) has recently attracted increasing attention due to its promising performance. However, existing DMVSC methods still have two issues: (1) they mainly focus on using autoencoders to nonlinearly…

Machine Learning · Computer Science 2023-05-12 Chenhang Cui , Yazhou Ren , Jingyu Pu , Xiaorong Pu , Lifang He

Cross-domain Sequential Recommendation (CSR) is an emerging yet challenging task that depicts the evolution of behavior patterns for overlapped users by modeling their interactions from multiple domains. Existing studies on CSR mainly focus…

Information Retrieval · Computer Science 2023-04-18 Jinyu Zhang , Huichuan Duan , Lei Guo , Liancheng Xu , Xinhua Wang

Tensor clustering, which seeks to extract underlying cluster structures from noisy tensor observations, has gained increasing attention. One extensively studied model for tensor clustering is the tensor block model, which postulates the…

Statistics Theory · Mathematics 2023-11-07 Yuchen Zhou , Yuxin Chen

Drug combination therapy has become a increasingly promising method in the treatment of cancer. However, the number of possible drug combinations is so huge that it is hard to screen synergistic drug combinations through wet-lab…

Machine Learning · Computer Science 2021-07-07 J. Wang , X. Liu , S. Shen , L. Deng , H. Liu*

We present the use of single-cell entropy (scEntropy) to measure the order of the cellular transcriptome profile from single-cell RNA-seq data, which leads to a method of unsupervised cell type classification through scEntropy followed by…

Quantitative Methods · Quantitative Biology 2020-02-18 Jingxin Liu , You Song , Jinzhi Lei

Identifying genes associated with diseases is crucial to understanding disease mechanisms and developing therapies. However, identification of individual genes associated with a disease often needs to be supplemented with clustering…

Genomics · Quantitative Biology 2026-04-30 Brayan Gutierrez , Rinki Ratnapriya , Arko Barman

In the field of multimedia, single image deraining is a basic pre-processing work, which can greatly improve the visual effect of subsequent high-level tasks in rainy conditions. In this paper, we propose an effective algorithm, called…

Computer Vision and Pattern Recognition · Computer Science 2020-08-07 Cong Wang , Yutong Wu , Zhixun Su , Junyang Chen