Related papers: Maintaining $k$-MinHash Signatures over Fully-Dyna…
This paper describes a new asynchronous algorithm and implementation for the problem of k-mer counting (KC), which concerns quantifying the frequency of length k substrings in a DNA sequence. This operation is common to many computational…
We adapt a well known streaming algorithm for approximating item frequencies to the matrix sketching setting. The algorithm receives the rows of a large matrix $A \in \R^{n \times m}$ one after the other in a streaming fashion. It maintains…
Hierarchical Density-Based Spatial Clustering of Applications with Noise (HDBSCAN) finds meaningful patterns in spatial data by considering density and spatial proximity. As the clustering algorithm is inherently designed for static…
Text indexing is a fundamental and well-studied problem. Classic solutions either replace the original text with a compressed representation, e.g., the FM-index and its variants, or keep it uncompressed but attach some redundancy - an index…
We present an approach for efficiently taking snapshots of the state of a collection of CAS objects. Taking a snapshot allows later operations to read the value that each CAS object had at the time the snapshot was taken. Taking a snapshot…
Operations over data streams typically hinge on efficient mechanisms to aggregate or summarize history on a rolling basis. For high-volume data steams, it is critical to manage state in a manner that is fast and memory efficient --…
We resolve the space complexity of linear sketches for approximating the maximum matching problem in dynamic graph streams where the stream may include both edge insertion and deletion. Specifically, we show that for any $\epsilon > 0$,…
Hashing has shown its efficiency and effectiveness in facilitating large-scale multimedia applications. Supervised knowledge e.g. semantic labels or pair-wise relationship) associated to data is capable of significantly improving the…
Minwise hashing (Minhash) is a widely popular indexing scheme in practice. Minhash is designed for estimating set resemblance and is known to be suboptimal in many applications where the desired measure is set overlap (i.e., inner product…
Identifying dense subgraphs known as quasi-cliques is pivotal in numerous graph mining tasks across domains such as social networks, biology, and e-commerce. While prior work has developed efficient algorithms for quasi-clique detection in…
Local moments are used for local regression, to compute statistical measures such as sums, averages, and standard deviations, and to approximate probability distributions. We consider the case where the data source is a very large I/O array…
Binary code similarity analysis (BCSA) is a crucial research area in many fields such as cybersecurity. Specifically, function-level diffing tools are the most widely used in BCSA: they perform function matching one by one for evaluating…
Online hashing has attracted extensive research attention when facing streaming data. Most online hashing methods, learning binary codes based on pairwise similarities of training instances, fail to capture the semantic relationship, and…
The maximum coverage problem is to select $k$ sets from a collection of sets such that the cardinality of the union of the selected sets is maximized. We consider $(1-1/e-\epsilon)$-approximation algorithms for this NP-hard problem in three…
Graph sketching is a powerful technique introduced by the seminal work of Ahn, Guha and McGregor'12 on connectivity in dynamic graph streams that has enjoyed considerable attention in the literature since then, and has led to near optimal…
The problem of dictionary matching is a classical problem in string matching: given a set S of d strings of total length n characters over an (not necessarily constant) alphabet of size sigma, build a data structure so that we can match in…
In this work, we propose a method for speeding up linear regression distributively, while ensuring security. We leverage randomized sketching techniques, and improve straggler resilience in asynchronous systems. Specifically, we apply a…
We introduce and study the problem of computing the similarity self-join in a streaming context (SSSJ), where the input is an unbounded stream of items arriving continuously. The goal is to find all pairs of items in the stream whose…
The aim of this paper is two-fold: firstly, to present subspace embedding properties for $s$-hashing sketching matrices, with $s\geq 1$, that are optimal in the projection dimension $m$ of the sketch, namely, $m=\mathcal{O}(d)$, where $d$…
Coverage problems are central in optimization and have a wide range of applications in data mining and machine learning. While several distributed algorithms have been developed for coverage problems, the existing methods suffer from…