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Purpose: Magnetic resonance fingerprinting (MRF) methods typically rely on dictio-nary matching to map the temporal MRF signals to quantitative tissue parameters. Such approaches suffer from inherent discretization errors, as well as high…

Image and Video Processing · Electrical Eng. & Systems 2021-03-11 Pingfan Song , Yonina C. Eldar , Gal Mazor , Miguel Rodrigues

Objective: Surface electromyography (EMG) is a non-invasive sensing modality widely used in biomechanics, rehabilitation, prosthetic control, and human-machine interfaces. Despite decades of use, achieving robust generalization across…

Signal Processing · Electrical Eng. & Systems 2026-01-16 Matteo Fasulo , Giusy Spacone , Thorir Mar Ingolfsson , Yawei Li , Luca Benini , Andrea Cossettini

Many existing learning-based deformable image registration methods impose constraints on deformation fields to ensure they are globally smooth and continuous. However, this assumption does not hold in cardiac image registration, where…

Image and Video Processing · Electrical Eng. & Systems 2024-07-12 Hang Zhang , Xiang Chen , Renjiu Hu , Dongdong Liu , Gaolei Li , Rongguang Wang

Purpose: Whole-heart MRA techniques typically target pre-determined motion states and address cardiac and respiratory dynamics independently. We propose a novel fast reconstruction algorithm, applicable to ungated free-running sequences,…

The dissociation of ligands from proteins and other biomacromolecules occurs over a wide range of timescales. For most pharmaceutically relevant inhibitors, these timescales are far beyond those that are accessible by conventional molecular…

Biomolecules · Quantitative Biology 2020-10-13 Daria B. Kokha , Bernd Doser , Stefan Richter , Fabian Ormersbach , Xingyi Cheng , Rebecca C. Wade

As deep learning gains popularity, edge IoT devices have seen proliferating deployment of pre-trained Deep Neural Network (DNN) models. These DNNs represent valuable intellectual property and face significant confidentiality threats from…

Cryptography and Security · Computer Science 2025-02-24 Ruyi Ding , Cheng Gongye , Davis Ranney , Aidong Adam Ding , Yunsi Fei

There is a growing need for unbiased clustering methods, ideally automated. We have developed a topology-based analysis tool called Two-Tier Mapper (TTMap) to detect subgroups in global gene expression datasets and identify their…

Genomics · Quantitative Biology 2018-01-08 Rachel Jeitziner , Mathieu Carrière , Jacques Rougemont , Steve Oudot , Kathryn Hess , Cathrin Brisken

The MammoGrid project has deployed its Service-Oriented Architecture (SOA)-based Grid application in a real environment comprising actual participating hospitals. The resultant setup is currently being exploited to conduct rigorous in-house…

Distributed, Parallel, and Cluster Computing · Computer Science 2007-05-23 S R Amendolia , F Estrella , C del Frate , J Galvez , W Hassan , T Hauer , D Manset , R McClatchey , M Odeh , D Rogulin , T Solomonides , R Warren

The synthesis of thinned isophoric arrays (TIAs) radiating mask-constrained patterns is addressed. By leveraging on the recently-introduced formulation of the design of antenna arrays in the autocorrelation-domain (AD), the TIA synthesis is…

Signal Processing · Electrical Eng. & Systems 2025-01-15 Lorenzo Poli , Giacomo Oliveri , Nicola Anselmi , Arianna Benoni , Luca Tosi , Andrea Massa

The disaggregated memory (DM) architecture offers high resource elasticity at the cost of data access performance. While caching frequently accessed data in compute nodes (CNs) reduces access overhead, it requires costly centralized…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-05-26 Hanze Zhang , Kaiming Wang , Rong Chen , Xingda Wei , Haibo Chen

Website fingerprinting attack (WFA) aims to deanonymize the website a user is visiting through anonymous networks channels (e.g., Tor). Despite of remarkable progress in the past years, most existing methods make implicitly a couple of…

Cryptography and Security · Computer Science 2024-10-28 Mantun Chen , Yongxin Chen , Yongjun Wang , Peidai Xie , Shaojing Fu , Xiatian Zhu

In recent years microbiome studies have become increasingly prevalent and large-scale. Through high-throughput sequencing technologies and well-established analytical pipelines, relative abundance data of operational taxonomic units and…

Methodology · Statistics 2022-05-12 Yan Li , Gen Li , Kun Chen

This paper presents a portable, privacy-preserving, in-browser platform for the reproducible assessment of mutational signature detection methods from sparse sequencing data generated by targeted gene panels. The platform aims to address…

Genomics · Quantitative Biology 2023-06-05 Aaron Ge , Tongwu Zhang , Clara Bodelon , Montserrat Garcia-Closas , Jonas Almeida , Jeya Balasubramanian

Microscopic examination of slides prepared from tissue samples is the primary tool for detecting and classifying cancerous lesions, a process that is time-consuming and requires the expertise of experienced pathologists. Recent advances in…

Computer Vision and Pattern Recognition · Computer Science 2024-10-15 Saba Fatema , Brighton Nuwagira , Sayoni Chakraborty , Reyhan Gedik , Baris Coskunuzer

The widespread use of multi-sensor technology and the emergence of big datasets has highlighted the limitations of standard flat-view matrix models and the necessity to move towards more versatile data analysis tools. We show that…

Numerical Analysis · Computer Science 2015-06-19 A. Cichocki , D. Mandic , A-H. Phan , C. Caiafa , G. Zhou , Q. Zhao , L. De Lathauwer

Tissue deformation recovery based on stereo endoscopic images is crucial for tool-tissue interaction analysis and benefits surgical navigation and autonomous soft tissue manipulation. Previous research suffers from the problems raised from…

Computer Vision and Pattern Recognition · Computer Science 2025-06-25 Jiahe Chen , Naoki Tomii , Ichiro Sakuma , Etsuko Kobayashi

Cache-coherent non-uniform memory access (ccNUMA) systems enable parallel applications to scale-up to thousands of cores and many terabytes of main memory. However, since remote accesses come at an increased cost, extra measures are…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-11-24 Daniel J. Blueman , Foivos Zakkak , Christos Kotselidis

Near-tissue computing requires sensor-level processing of high-resolution images, essential for real-time biomedical diagnostics and surgical guidance. To address this need, we introduce a novel Capacitive Transimpedance Amplifier-based…

Image and Video Processing · Electrical Eng. & Systems 2025-03-24 Zihan Yin , Subhradip Chakraborty , Ankur Singh , Chengwei Zhou , Gourav Datta , Akhilesh Jaiswal

Current FP8 grouped GEMM implementations require padding each group to a fixed alignment (e.g., 128), incurring memory and computational overhead. We propose \textit{TMA-Adaptive FP8 Grouped GEMM}, which eliminates padding by dynamically…

Hardware Architecture · Computer Science 2025-08-26 Zhongling Su , Rong Fu , Weihan Cao , Jianfei Gao , Minxi Jin , Zhilin Pei , Hui Wang

Detecting transient light curves (e.g., transiting planets) requires high precision data, and thus it is important to effectively filter systematic trends affecting ground based wide field surveys. We apply an implementation of the Trend…

Instrumentation and Methods for Astrophysics · Physics 2016-06-29 Giri Gopalan , Peter Plavchan , Julian van Eyken , David Ciardi , Kaspar von Braun , Stephen R. Kane