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Intrusion detection has been a key topic in the field of cyber security, and the common network threats nowadays have the characteristics of varieties and variation. Considering the serious imbalance of intrusion detection datasets will…

Cryptography and Security · Computer Science 2022-04-15 Zhewei Chen , Wenwen Yu , Linyue Zhou

The reconstruction of missing information in epidemic spreading on contact networks can be essential in the prevention and containment strategies. The identification and warning of infectious but asymptomatic individuals (i.e., contact…

Social and Information Networks · Computer Science 2022-11-21 Indaco Biazzo , Alfredo Braunstein , Luca Dall'Asta , Fabio Mazza

Community science observational datasets are useful in epidemiology and ecology for modeling species distributions, but the heterogeneous nature of the data presents significant challenges for standardization, data quality assurance and…

Populations and Evolution · Quantitative Biology 2025-12-10 Richard Littauer , Kris Bubendorfer

The Influenza virus can be considered as one of the most severe viruses that can infect multiple species with often fatal consequences to the hosts. The Hemagglutinin (HA) gene of the virus can be a target for antiviral drug development…

Quantitative Methods · Quantitative Biology 2021-08-11 Charalambos Chrysostomou , Floris Alexandrou , Mihalis A. Nicolaou , Huseyin Seker

The increasing complexity of machine learning (ML) and artificial intelligence (AI) models has created a pressing need for tools that help scientists, engineers, and policymakers interpret and refine model decisions and predictions.…

Machine Learning · Statistics 2025-07-17 Haolin Zou , Arnab Auddy , Yongchan Kwon , Kamiar Rahnama Rad , Arian Maleki

Understanding how genetic changes allow emerging virus strains to escape the protection afforded by vaccination is vital for the maintenance of effective vaccines. In the current work, we use structural and phylogenetic differences between…

Applications · Statistics 2019-05-14 Vinny Davies , William T. Harvey , Richard Reeve , Dirk Husmeier

The ability to accurately forecast and control inpatient census, and thereby workloads, is a critical and longstanding problem in hospital management. Majority of current literature focuses on optimal scheduling of inpatients, but largely…

Methodology · Statistics 2017-01-31 Chitta Ranjan , Kamran Paynabar , Jonathan E. Helm , Julian Pan

Observational data in medicine arise as a result of the complex interaction between patients and the healthcare system. The sampling process is often highly irregular and itself constitutes an informative process. When using such data to…

Machine Learning · Computer Science 2022-05-27 Vincent Jeanselme , Glen Martin , Niels Peek , Matthew Sperrin , Brian Tom , Jessica Barrett

Beyond estimating parameters of interest from data, one of the key goals of statistical inference is to properly quantify uncertainty in these estimates. In Bayesian inference, this uncertainty is provided by the posterior distribution, the…

Machine Learning · Computer Science 2025-01-03 Daniela de Albuquerque , John Pearson

Big Bayes is the computationally intensive co-application of big data and large, expressive Bayesian models for the analysis of complex phenomena in scientific inference and statistical learning. Standing as an example, Bayesian…

The COVID-19 pandemic has brought forth the importance of epidemic forecasting for decision makers in multiple domains, ranging from public health to the economy as a whole. While forecasting epidemic progression is frequently…

Machine Learning · Computer Science 2022-07-21 Alexander Rodríguez , Harshavardhan Kamarthi , Pulak Agarwal , Javen Ho , Mira Patel , Suchet Sapre , B. Aditya Prakash

This paper proposes a novel approach to predict epidemiological parameters by integrating new real-time signals from various sources of information, such as novel social media-based population density maps and Air Quality data. We implement…

Machine Learning · Computer Science 2023-07-04 Romain Molinas , César Quilodrán Casas , Rossella Arcucci , Ovidiu Şerban

The emerging threat of a human pandemic caused by the H5N1 avian influenza virus strain magnifies the need for controlling the incidence of H5N1 infection in domestic bird populations. Culling is one of the most widely used control measures…

Populations and Evolution · Quantitative Biology 2013-09-03 Hayriye Gulbudak , Maia Martcheva

Modern ML methods excel when training data is IID, large-scale, and well labeled. Learning in less ideal conditions remains an open challenge. The sub-fields of few-shot, continual, transfer, and representation learning have made…

Computer Vision and Pattern Recognition · Computer Science 2023-04-12 Matthew Wallingford , Aditya Kusupati , Keivan Alizadeh-Vahid , Aaron Walsman , Aniruddha Kembhavi , Ali Farhadi

Various AI models are increasingly being considered as part of clinical decision-support tools. However, the trustworthiness of such models is rarely considered. Clinicians are more likely to use a model if they can understand and trust its…

Artificial Intelligence · Computer Science 2020-03-09 Evangelia Kyrimi , Somayyeh Mossadegh , Nigel Tai , William Marsh

The seasonal human influenza virus undergoes rapid evolution, leading to significant changes in circulating viral strains from year to year. These changes are typically driven by adaptive mutations, particularly in the antigenic epitopes,…

Populations and Evolution · Quantitative Biology 2024-11-28 Matthijs Meijers , Denis Ruchnewitz , Jan Eberhardt , Malancha Karmakar , Marta Łuksza , Michael Lässig

In this paper we tackle the problem of point and probabilistic forecasting by describing a blending methodology of machine learning models that belong to gradient boosted trees and neural networks families. These principles were…

Machine Learning · Computer Science 2023-10-23 Ioannis Nasios , Konstantinos Vogklis

The ABCD Neurocognitive Prediction Challenge is a community driven competition asking competitors to develop algorithms to predict fluid intelligence score from T1-w MRIs. In this work, we propose a deep learning combined with gradient…

Computer Vision and Pattern Recognition · Computer Science 2019-10-18 Yeeleng S. Vang , Yingxin Cao , Xiaohui Xie

Mobile sensing appears as a promising solution for health inference problem (e.g., influenza-like symptom recognition) by leveraging diverse smart sensors to capture fine-grained information about human behaviors and ambient contexts.…

Machine Learning · Computer Science 2023-12-21 Guimin Dong , Lihua Cai , Mingyue Tang , Laura E. Barnes , Mehdi Boukhechba

Large-scale black-box models have become ubiquitous across numerous applications. Understanding the influence of individual training data sources on predictions made by these models is crucial for improving their trustworthiness. Current…

Machine Learning · Computer Science 2024-06-21 Myeongseob Ko , Feiyang Kang , Weiyan Shi , Ming Jin , Zhou Yu , Ruoxi Jia