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Helicon plasma sources play a central role in applications ranging from material treatment to space propulsion and fusion, yet the physical processes governing their ignition, transient ionization, and mode evolution remain incompletely…

Comprehending the nature of action potentials is fundamental to our understanding of the functioning of nervous systems in general. Here we consider their evolution and describe their functions of communication, modulation and computation…

Neurons and Cognition · Quantitative Biology 2021-06-11 William Winlow , Andrew Simon Johnson

A discrete rate theory for general multi-ion channels is presented, in which the continuous dynamics of ion diffusion is reduced to transitions between Markovian discrete states. In an open channel, the ion permeation process involves three…

Biological Physics · Physics 2012-06-29 Wan Chen , Radek Erban , S. Jonathan Chapman

Transmembrane ion flow through channel proteins undergoing density fluctuations may cause lateral gradients of the electrical potential across the membrane giving rise to electrophoresis of charged channels. A model for the dynamics of the…

Pattern Formation and Solitons · Physics 2009-11-11 Markus Hilt , Walter Zimmermann

Noise induced excitability is studied in type I and II Morris-Lecar neurons subject to constant sub threshold input, where fluctuations arise from sodium and potassium ion channels. Ion channels open and close randomly, creating current…

Cell Behavior · Quantitative Biology 2014-09-08 Jay Newby

The saltatory propagation of action potentials on myelinated axons is conventionally explained by the mechanism employing local circuit ionic current flows between nodes of Ranvier. Under this framework, the myelin sheath with up to 100…

Neurons and Cognition · Quantitative Biology 2012-10-09 Jiongwei Xue , Shengyong Xu

A model study of propidium iodide delivery with millisecond electric pulses is presented; this work is a companion of the experimental efforts by Sadik et al. [1]. Both membrane permeabilization and delivery are examined with respect to six…

Biological Physics · Physics 2014-01-28 Miao Yu , Hao Lin

It is typically assumed that emission in the passbands of the Atmospheric Imaging Assembly (AIA) onboard the Solar Dynamics Observatory (SDO) is dominated by single or several strong lines from ions that under equilibrium conditions are…

Solar and Stellar Astrophysics · Physics 2017-10-23 Juan Martinez-Sykora , Bart De Pontieu , Paola Testa , Viggo Hansteen

We report on a theoretical study showing that the leak conductance density, $\GL$, in the squid giant axon appears to be optimal for the action potential firing frequency. More precisely, the standard assumption that the leak current is…

Neurons and Cognition · Quantitative Biology 2015-05-13 Jeffrey Seely , Patrick Crotty

One of the most celebrated successes in computational biology is the Hodgkin-Huxley framework for modeling electrically active cells. This framework, expressed through a set of differential equations, synthesizes the impact of ionic…

Neurons and Cognition · Quantitative Biology 2015-05-28 Joshua H. Goldwyn , Eric Shea-Brown

Virtually all cells use energy and ion-specific membrane pumps to maintain large transmembrane gradients of Na$^+$, K$^+$, Cl$^-$, Mg$^{++}$, and Ca$^{++}$. Although they consume up to 1/3 of a cell's energy budget, the corresponding…

Cell Behavior · Quantitative Biology 2024-03-18 Dipesh Niraula , Issam El Naqa , Jack Adam Tuszynski , Robert A. Gatenby

Action potential generation underlies some of the most consequential dynamical systems on Earth, from brains to hearts. It is therefore interesting to develop synthetic cell-free systems, based on the same molecular mechanisms, which may…

Biological Physics · Physics 2024-03-07 Ziqi Pi , Giovanni Zocchi

Comprehending the nature of action potentials is fundamental to our understanding of the functioning of nervous systems in general. The ionic mechanisms underlying action potentials in the squid giant axon were first described by Hodgkin…

Neurons and Cognition · Quantitative Biology 2025-08-07 William Winlow , Andrew Simon Johnson

We show that ion trapping in virtual cathodes can raise the transmitted current of emitted electrons much closer to the full emission than is predicted by theories without trapped ions. The transmitted current is controlled by the well…

Plasma Physics · Physics 2025-01-03 Z. L. Idema , M. D. Campanell

The generation of action potential brings into play specific mechanosensory stimuli manifest in the variation of membrane capacitance, resulting from the selective membrane permeability to ions exchanges and testifying to the central role…

Neurons and Cognition · Quantitative Biology 2021-02-23 Alain M. Dikande

This letter introduces a formalism for modeling time-variant channels for diffusive molecular communication systems. In particular, we consider a fluid environment where one transmitter nano-machine and one receiver nano-machine are…

Information Theory · Computer Science 2017-03-08 Arman Ahmadzadeh , Vahid Jamali , Adam Noel , Robert Schober

Standing slow-mode waves have been recently observed in flaring loops by the Atmospheric Imaging Assembly (AIA) of the Solar Dynamics Observatory (SDO). By means of the coronal seismology technique transport coefficients in hot ($\sim$10…

Solar and Stellar Astrophysics · Physics 2018-07-04 Tongjiang Wang , Leon Ofman , Xudong Sun , Sami K Solanki , Joseph M Davila

The ionization potential distributions of hydrated hydroxide and hydronium are computed with many-body approach for electron excitations with configurations generated by {\it ab initio} molecular dynamics. The experimental features are well…

Chemical Physics · Physics 2014-01-20 Charles W. Swartz , Xifan Wu

We consider an exactly tractable model of the Kramers type for the voltage-dependent gating dynamics of single ion channels. It is assumed that the gating dynamics is caused by the thermally activated transitions in a bistable potential.…

Biological Physics · Physics 2009-11-11 Igor Goychuk , Peter Hanggi

We introduce a model for ionic electrodiffusion and osmotic water flow through cells and tissues. The model consists of a system of partial differential equations for ionic concentration and fluid flow with interface conditions at deforming…

Cell Behavior · Quantitative Biology 2017-08-23 Yoichiro Mori , Chun Liu , Robert S. Eisenberg