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Previous studies of streamer discharge branching mechanisms have mainly been generative other than predictive. To predict or even control branching, a reliable connection between experimental conditions and streamer branching needs to be…

Plasma Physics · Physics 2019-03-27 Yujie Zhu , Xuewei Zhang , Chijie Zhuang , Rong Zeng , Jinliang He

Excitable media are systems which are at rest in the absence of external input but which respond to a sufficiently strong stimulus by sending a wave of "excitation" across the medium. Examples include cardiac and cortical tissue, and in…

Quantitative Methods · Quantitative Biology 2021-01-01 S. P. Hastings , M. M Sussman

The classical Hodgkin--Huxley (HH) model neglects the time-dependence of ion concentrations in spiking dynamics. The dynamics is therefore limited to a time scale of milliseconds, which is determined by the membrane capacitance multiplied…

Neurons and Cognition · Quantitative Biology 2014-12-09 Niklas Hübel , Markus A. Dahlem

It is well known that at the gel-liquid phase transition temperature a lipid bilayer membrane exhibits an increased ion permeability. We analyze the quantized currents in which the increased permeability presents itself. The open time…

Biological Physics · Physics 2010-07-07 Jill Gallaher , Katarzyna Wodzinska , Thomas Heimburg , Martin Bier

A model of mobile, charged ion channels in a fluid membrane is studied. The channels may switch between an open and a closed state according to a simple two-state kinetics with constant rates. The effective electrophoretic charge and the…

Soft Condensed Matter · Physics 2009-11-07 Stephan C. Kramer , Reiner Kree

Mathematical models of a cellular action potential in cardiac modelling have become increasingly complex, particularly in gating kinetics which control the opening and closing of individual ion channel currents. As cardiac models advance…

Quantitative Methods · Quantitative Biology 2021-04-28 C. Houston , B. Marchand , L. Engelbert , C. D. Cantwell

Using periodic boundary conditions and a constant applied field, we have simulated current flow through an 8.125 Angstrom internal diameter, rigid, atomistic channel with polar walls in a rigid membrane using explicit ions and SPC/E water.…

Biological Physics · Physics 2009-11-07 Paul S. Crozier , Douglas Henderson , Richard L. Rowley , David D. Busath

Mathematical models for the generation of the action potential can improve the understanding of physiological mechanisms that are consequence of the electrical activity in neurons. In such models, some equations involving empirically…

Neurons and Cognition · Quantitative Biology 2023-04-05 Lautaro Estienne

The physiology of voltage gated ion channels is complex and insights into their gating mechanism is incomplete. Their function is best represented by Markov models with relatively large number of distinct states that are connected by…

Subcellular Processes · Quantitative Biology 2013-12-17 Febe Francis , Míriam R. García , Oliver Mason , Richard H. Middleton

The flow of ions through permeable channels causes voltage drop in physiological nanodomains such as synapses, dendrites and dendritic spines, and other protrusions. How the voltage changes around channels in these nanodomains has remained…

Soft Condensed Matter · Physics 2025-01-10 Frédéric Paquin-Lefebvre , David Holcman

We find that the adiabatic fluctuations produced in the primordial plasma by cosmological inflation resonantly excite the axion field during the QCD phase transition by pumping axions from low momentum modes to modes with momentum up to of…

High Energy Physics - Phenomenology · Physics 2022-03-09 Pierre Sikivie , Wei Xue

We show that the action potential signals generated inside axons are reaction-diffusion solitons or reaction-diffusion waves, refuting the Hodgkin and Huxley hypothesis that action potentials propagate along axons with an elastic wave…

Neurons and Cognition · Quantitative Biology 2022-07-28 Gaspar Cano , Rui Dilão

We present a simple one-dimensional trapping model prompted by the problem of ion current across biological membranes. The trap is modeled mimicking the ionic channel membrane behaviour. Such voltage-sensitive channels are open or closed…

Statistical Mechanics · Physics 2009-10-31 Alejandro D. Sanchez , Jorge A. Revelli , Horacio S. Wio

We consider a stochastic version of an excitable system based on the Morris-Lecar model of a neuron, in which the noise originates from stochastic Sodium and Potassium ion channels opening and closing. One can analyze neural excitability in…

Neurons and Cognition · Quantitative Biology 2015-06-15 Jay M. Newby , Paul C. Bressloff , James P. Keener

In this paper we report the theory describing the electro-osmotic flow in charged nanopores with constant radius and charge density driven by alternating current. We solve the ion and solution transport in unsteady conditions as described…

Chemical Physics · Physics 2018-10-17 J. Catalano , P. M. Biesheuvel

We consider the diffusion-advection problem in two simple cellular flow models (often invoked as examples for subdiffusive tracer's motion) and concentrate on the intermediate time range, in which the tracer's motion indeed may show…

Fluid Dynamics · Physics 2016-09-28 Patrick Pöschke , Igor M. Sokolov , Alexander A. Nepomnyashchy , Michael A. Zaks

This article provides a theoretical basis for relating macroscopic electrical signals recorded from biological tissue, such as electroencephalogram (EEG) and local field potential (LFP), to the electrophysiological processes at the cellular…

Neurons and Cognition · Quantitative Biology 2012-09-24 Hiroyoshi Miyakawa , Toru Aonishi

Ion diffusion is important in a variety of applications, yet fundamental understanding of the diffusive process in solids is still missing, especially considering the interaction of lattice vibrations (phonons) and the mobile species. In…

Materials Science · Physics 2020-12-02 Kiarash Gordiz , Sokseiha Muy , Wolfgang G. Zeier , Yang Shao-Horn , Asegun Henry

To study acoustic wave propagation and the corresponding energy deposition in partially ionized plasmas, we use a two-fluid computational model that treats neutrals and charged particles (electrons and ions) as two separate fluids. This…

Plasma Physics · Physics 2021-04-26 Fan Zhang , Stefaan Poedts , Andrea Lani , Błażej Kuźma , Kris Murawski

In this paper we construct a mathematical model for excitable membranes by introducing circuit characteristics for ion pump, ion current activation, and voltage-gating. The model is capable of reestablishing the Nernst resting potentials,…

Neurons and Cognition · Quantitative Biology 2015-05-14 Bo Deng