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We aim to detect pancreatic ductal adenocarcinoma (PDAC) in abdominal CT scans, which sheds light on early diagnosis of pancreatic cancer. This is a 3D volume classification task with little training data. We propose a two-stage framework,…

Computer Vision and Pattern Recognition · Computer Science 2019-08-22 Fengze Liu , Lingxi Xie , Yingda Xia , Elliot K. Fishman , Alan L. Yuille

The highly conserved spindle assembly checkpoint (SAC) ensures that the sister chromatids of the duplicated genome are not separated and distributed to the spindle poles before all chromosomes have been properly linked to the microtubules…

Molecular Networks · Quantitative Biology 2016-11-18 Bashar Ibrahim

Variation in nuclear size and shape is an important criterion of malignancy for many tumor types; however, categorical estimates by pathologists have poor reproducibility. Measurements of nuclear characteristics (morphometry) can improve…

We employ a multi-scale mechanistic approach to investigate radiation induced cell toxicities and deactivation mechanisms as a function of linear energy transfer in hadron therapy. Our theoretical model consists of a system of Markov chains…

Medical Physics · Physics 2019-05-01 Ramin Abolfath , Yusuf Helo , Lawrence Bronk , Alejandro Carabe , David Grosshans , Radhe Mohan

Cellular responses to death-promoting stimuli typically proceed through a differentiated multistage process, involving a lag phase, extensive death, and potential adaptation. Deregulation of this chain of events is at the root of many…

Cell Behavior · Quantitative Biology 2010-12-03 Jose M. G. Vilar

Colorectal cancer is among the most common malignancies and can develop from high-risk colon polyps. Colonoscopy is an effective screening tool to detect and remove polyps, especially in the case of precancerous lesions. However, the…

Image and Video Processing · Electrical Eng. & Systems 2022-03-02 Dinh Viet Sang , Tran Quang Chung , Phan Ngoc Lan , Dao Viet Hang , Dao Van Long , Nguyen Thi Thuy

Resistance to chemotherapies, particularly to anticancer treatments, is an increasing medical concern. Among the many mechanisms at work in cancers, one of the most important is the selection of tumor cells expressing resistance genes or…

Analysis of PDEs · Mathematics 2012-07-05 Alexander Lorz , Tommaso Lorenzi , Michael E. Hochberg , Jean Clairambault , Benoit Perthame

Colorectal cancer (CRC) is highly heterogeneous, with five-year survival rates dropping from $\sim$90% in localized disease to $\sim$15% with distant metastases. Disease progression is shaped not only by tumor-intrinsic alterations but also…

Pancreatic ductal adenocarcinoma (PDAC) is the third most common cause of cancer death in the United States. Predicting tumors like PDACs (including both classification and segmentation) from medical images by deep learning is becoming a…

Computer Vision and Pattern Recognition · Computer Science 2021-06-01 Yan Wang , Peng Tang , Yuyin Zhou , Wei Shen , Elliot K. Fishman , Alan L. Yuille

Colorectal cancer is the fourth leading cause of cancer deaths worldwide and the second leading cause in the United States. The risk of colorectal cancer can be mitigated by the identification and removal of premalignant lesions through…

Computer Vision and Pattern Recognition · Computer Science 2017-11-29 Faisal Mahmood , Nicholas J. Durr

Colorectal cancer (CRC) is one of the most commonly diagnosed cancers and a leading cause of cancer deaths in the United States. Colorectal polyps that grow on the intima of the colon or rectum is an important precursor for CRC. Currently,…

Image and Video Processing · Electrical Eng. & Systems 2019-12-30 Xinzi Sun , Pengfei Zhang , Dechun Wang , Yu Cao , Benyuan Liu

Colorectal cancer is the third-most common cancer in the Western Hemisphere. The segmentation of colorectal and colorectal cancer by computed tomography is an urgent problem in medicine. Indeed, a system capable of solving this problem will…

Image and Video Processing · Electrical Eng. & Systems 2024-08-01 I. M. Chernenkiy , Y. A. Drach , S. R. Mustakimova , V. V. Kazantseva , N. A. Ushakov , S. K. Efetov , M. V. Feldsherov

Polyp segmentation is a critical step in colorectal cancer detection, yet it remains challenging due to the diverse shapes, sizes, and low contrast boundaries of polyps in medical imaging. In this work, we propose a novel framework that…

Computer Vision and Pattern Recognition · Computer Science 2025-09-30 Fatemeh Salahi Chashmi , Roya Sotoudeh

Colorectal cancer is a deadly disease that has become increasingly prevalent in recent years. Early detection is crucial for saving lives, but traditional diagnostic methods such as colonoscopy and biopsy have limitations. Colonoscopy…

Machine Learning · Statistics 2023-07-18 Shangqing Tong , Peng Ge , Yanan Jiao , Zhaofu Ma , Ziye Li , Longhai Liu , Feng Gao , Xiaohui Du , Fei Gao

In this paper, we describe a dataset relating to cellular and physical conditions of patients who are operated upon to remove colorectal tumours. This data provides a unique insight into immunological status at the point of tumour removal,…

Machine Learning · Computer Science 2016-11-17 Chris Roadknight , Uwe Aickelin , Guoping Qiu , John Scholefield , Lindy Durrant

Pancreatic ductal adenocarcinoma (PDAC) is a highly lethal cancer in which the tumor-vascular involvement greatly affects the resectability and, thus, overall survival of patients. However, current prognostic prediction methods fail to…

Image and Video Processing · Electrical Eng. & Systems 2023-09-14 Hexin Dong , Jiawen Yao , Yuxing Tang , Mingze Yuan , Yingda Xia , Jian Zhou , Hong Lu , Jingren Zhou , Bin Dong , Le Lu , Li Zhang , Zaiyi Liu , Yu Shi , Ling Zhang

We investigate the dynamics of cancer initiation in a mathematical model with one driver mutation and several passenger mutations. Our analysis is based on a multi type branching process: We model individual cells which can either divide or…

Populations and Evolution · Quantitative Biology 2015-04-14 Benedikt Bauer , Reiner Siebert , Arne Traulsen

We study the application of a quasi-Monte Carlo (QMC) method to a class of semi-linear parabolic reaction-diffusion partial differential equations used to model tumor growth. Mathematical models of tumor growth are largely phenomenological…

Numerical Analysis · Mathematics 2026-02-23 Alexander D. Gilbert , Frances Y. Kuo , Dirk Nuyens , Graham Pash , Ian H. Sloan , Karen E. Willcox

Breast cancer is the most prevalent cancer among women and predicting pathologic complete response (pCR) after anti-cancer treatment is crucial for patient prognosis and treatment customization. Deep learning has shown promise in medical…

Image and Video Processing · Electrical Eng. & Systems 2024-10-02 Jonghun Kim , Hyunjin Park

Colorectal cancer (CRC), a lethal disease, begins with the growth of abnormal mucosal cell proliferation called polyps in the inner wall of the colon. When left undetected, polyps can become malignant tumors. Colonoscopy is the standard…

Computer Vision and Pattern Recognition · Computer Science 2025-09-24 Siddharth Gupta , Jitin Singla