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Multi-gene panel testing allows many cancer susceptibility genes to be tested quickly at a lower cost making such testing accessible to a broader population. Thus, more patients carrying pathogenic germline mutations in various…

Colonoscopy screening effectively identifies and removes polyps before they progress to colorectal cancer (CRC), but current follow-up guidelines rely primarily on histopathological features, overlooking other important CRC risk factors.…

Computer Vision and Pattern Recognition · Computer Science 2025-04-15 Shuai Jiang , Christina Robinson , Joseph Anderson , William Hisey , Lynn Butterly , Arief Suriawinata , Saeed Hassanpour

Background: An asymptotic normalization coefficient (ANC) characterizes the asymptotic form of a one-nucleon overlap integral required for description of nucleon-removal reactions. Purpose: We investigate the impact of the particle…

Nuclear Theory · Physics 2015-06-04 J. Okołowicz , N. Michel , W. Nazarewicz , M. Płoszajczak

Many types of tumors exhibit chromosomal losses or gains, as well as local amplifications and deletions. Within any given tumor type, sample specific amplifications and deletionsare also observed. Typically, a region that is aberrant in…

Genomics · Quantitative Biology 2008-12-10 Tal Shay , Wanyu L. Lambiv , Anat Reiner , Monika E. Hegi , Eytan Domany

Using 31P-NMR spectroscopy the chronological behavior of the ATP-metabolism of the tumor spheroids C3H-MA, 9L-Gliome and the mono-layer L1210 has been analyzed via decrease of the {\beta}-peak. All three cell lines show characteristic…

Medical Physics · Physics 2011-12-13 W. Ulmer

Accurate and automated tumor segmentation is highly desired since it has the great potential to increase the efficiency and reproducibility of computing more complete tumor measurements and imaging biomarkers, comparing to (often partial)…

Image and Video Processing · Electrical Eng. & Systems 2020-08-26 Ling Zhang , Yu Shi , Jiawen Yao , Yun Bian , Kai Cao , Dakai Jin , Jing Xiao , Le Lu

Gene enhancers control when and where genes switch on, yet their sequence diversity and tissue specificity make them hard to pinpoint in colorectal cancer. We take a sequence-only route and fine-tune DNABERT-2, a transformer genomic…

Genomics · Quantitative Biology 2025-10-01 Darren King , Yaser Atlasi , Gholamreza Rafiee

Colorectal cancer (CRC) is among the most prevalent cancers in the world. Due to numerous scholarly papers and broad enquiries about specific use cases for artificial intelligence (AI) in colorectal cancer, researchers find it challenging…

Image and Video Processing · Electrical Eng. & Systems 2024-07-10 Mary Adewunmi , Reem Abdel-Salam

Colorectal polyps are structural abnormalities of the gastrointestinal tract that can potentially become cancerous in some cases. The study introduces a novel framework for colorectal polyp segmentation named the Multi-Scale and Multi-Path…

Image and Video Processing · Electrical Eng. & Systems 2024-12-04 Malik Abdul Manan , Feng Jinchao , Muhammad Yaqub , Shahzad Ahmed , Syed Muhammad Ali Imran , Imran Shabir Chuhan , Haroon Ahmed Khan

We investigate a method of selectively targeting cancer cells by means of ultrasound harmonic excitation at their resonance frequency, which we refer to as oncotripsy. The geometric model of the cells takes into account the cytoplasm,…

Biological Physics · Physics 2020-07-21 Stefanie Heyden , Michael Ortiz

The somatic mutations in the pathways that drive cancer development tend to be mutually exclusive across tumors, providing a signal for distinguishing driver mutations from a larger number of random passenger mutations. This mutual…

Quantitative Methods · Quantitative Biology 2016-07-11 Mark D. M. Leiserson , Matthew A. Reyna , Benjamin J. Raphael

Cancer results from genetic alterations that disturb the normal cooperative behavior of cells. Recent high-throughput genomic studies of cancer cells have shown that the mutational landscape of cancer is complex and that individual cancers…

Populations and Evolution · Quantitative Biology 2011-11-10 Niko Beerenwinkel , Tibor Antal , David Dingli , Arne Traulsen , Kenneth W. Kinzler , Victor E. Velculescu , Bert Vogelstein , Martin A. Nowak

Early detection improves prognosis in pancreatic ductal adenocarcinoma (PDAC) but is challenging as lesions are often small and poorly defined on contrast-enhanced computed tomography scans (CE-CT). Deep learning can facilitate PDAC…

Image and Video Processing · Electrical Eng. & Systems 2022-01-14 Natália Alves , Megan Schuurmans , Geke Litjens , Joeran S. Bosma , John Hermans , Henkjan Huisman

We developed and applied rapid scanning laser-emission microscopy to detect abnormal changes in cell nuclei for early diagnosis of cancer and cancer precursors. Regulation of chromatins is essential for genetic development and normal cell…

Tissues and Organs · Quantitative Biology 2018-07-23 Yu-Cheng Chen , Qiushu Chen , Xiaotain Tan , Grace Chen , Ingrid Bergin , Muhammad Nadeem Aslam , Xudong Fan

Estimating the required dose in radiotherapy is of crucial importance since the administrated dose should be sufficient to eradicate the tumor and at the same time should inflict minimal damage on normal cells. The probability that a given…

Quantitative Methods · Quantitative Biology 2013-12-31 Andrew Dhawan , Kamran Kaveh , Mohammad Kohandel , Siv Sivaloganathan

The tumour control probability (TCP) is a formalism derived to compare various treatment regimens of radiation therapy, defined as the probability that given a prescribed dose of radiation, a tumour has been eradicated or controlled. In the…

Quantitative Methods · Quantitative Biology 2015-06-18 A. Dhawan , M. Kohandel , R. P. Hill , S. Sivaloganathan

Pancreatic ductal adenocarcinoma (PDAC) is one of the most aggressive forms of pancreatic cancer and is often diagnosed at an advanced stage due to subtle early imaging signs. To enable earlier detection and improve clinical…

Computer Vision and Pattern Recognition · Computer Science 2025-12-16 Han Liu , Riqiang Gao , Eileen Krieg , Sasa Grbic

Background and Objective: Only about 14 % of eligible EU citizens finally participate in colorectal cancer (CRC) screening programs despite it being the third most common type of cancer worldwide. The development of CRC risk models can…

We propose a new model of cancer growth based on nonextensive entropy. The evolution equation depends on the nonextensive parameter q. The exponential, the logistic, and the Gompertz growth laws are particular cases of the generalized…

Medical Physics · Physics 2009-11-11 Jorge A. González , Irving Rondón

In the Coulomb and Proximity Potential Model (CPPM) framework, we have investigated the cluster radioactivity and alpha decay half-lives of superheavy nuclei. We study 22 different versions of proximity potential forms that have been…

Nuclear Theory · Physics 2025-03-17 Xuanpeng Xiao , Panpan Qi , Gongming Yu , Haitao Yang , Qiang Hu