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An abelian square is the concatenation of two words that are anagrams of one another. A word of length $n$ can contain $\Theta(n^2)$ distinct factors that are abelian squares. We study infinite words such that the number of abelian square…

Discrete Mathematics · Computer Science 2015-06-12 Gabriele Fici , Filippo Mignosi

We generalize Axel Thue's familiar definition of overlaps in words, and show that there are no infinite words containing split occurrences of these generalized overlaps. Along the way we prove a useful theorem about repeated disjoint…

Discrete Mathematics · Computer Science 2020-02-27 Daniel Gabric , Jeffrey Shallit

A binary tanglegram is a pair <S,T> of binary trees whose leaf sets are in one-to-one correspondence; matching leaves are connected by inter-tree edges. For applications, for example in phylogenetics or software engineering, it is required…

Data Structures and Algorithms · Computer Science 2009-05-15 Martin Nöllenburg , Danny Holten , Markus Völker , Alexander Wolff

An overlap-free (or $\beta$-free) word $w$ over a fixed alphabet $\Sigma$ is extremal if every word obtained from $w$ by inserting a single letter from $\Sigma$ at any position contains an overlap (or a factor of exponent at least $\beta$,…

Combinatorics · Mathematics 2020-06-19 Lucas Mol , Narad Rampersad , Jeffrey Shallit

Word $W$ is said to encounter word $V$ provided there is a homomorphism $\phi$ mapping letters to nonempty words so that $\phi(V)$ is a substring of $W$. For example, taking $\phi$ such that $\phi(h)=c$ and $\phi(u)=ien$, we see that…

Combinatorics · Mathematics 2016-10-18 Joshua Cooper , Danny Rorabaugh

A string attractor of a string $T[1..|T|]$ is a set of positions $\Gamma$ of $T$ such that any substring $w$ of $T$ has an occurrence that crosses a position in $\Gamma$, i.e., there is a position $i$ such that $w = T[i..i+|w|-1]$ and the…

Combinatorics · Mathematics 2026-02-19 Mutsunori Banbara , Hideo Bannai , Peaker Guo , Dominik Köppl , Takuya Mieno , Yoshio Okamoto

A double occurrence word $w$ over a finite alphabet $\Sigma$ is a word in which each alphabet letter appears exactly twice. Such words arise naturally in the study of topology, graph theory, and combinatorics. Recently, double occurrence…

Combinatorics · Mathematics 2012-05-01 Jonathan Burns , Tilahun Muche

The combinatorics of squares in a word depends on how the equivalence of halves of the square is defined. We consider Abelian squares, parameterized squares, and order-preserving squares. The word $uv$ is an Abelian (parameterized,…

Discrete Mathematics · Computer Science 2016-04-11 Tomasz Kociumaka , Jakub Radoszewski , Wojciech Rytter , Tomasz Waleń

We revisit the topic of power-free morphisms, focusing on the properties of the class of complementary morphisms. Such morphisms are defined over a $2$-letter alphabet, and map the letters 0 and 1 to complementary words. We prove that every…

Combinatorics · Mathematics 2023-12-11 Jeffrey Shallit , Arseny M. Shur , Stefan Zorcic

A universal word for a finite alphabet $A$ and some integer $n\geq 1$ is a word over $A$ such that every word in $A^n$ appears exactly once as a subword (cyclically or linearly). It is well-known and easy to prove that universal words exist…

Combinatorics · Mathematics 2023-06-22 Herman Z. Q. Chen , Sergey Kitaev , Torsten Mütze , Brian Y. Sun

We investigate the least number of palindromic factors in an infinite word. We first consider general alphabets, and give answers to this problem for periodic and non-periodic words, closed or not under reversal of factors. We then…

Discrete Mathematics · Computer Science 2014-07-15 Gabriele Fici , Luca Q. Zamboni

Tandem duplication in DNA is the process of inserting a copy of a segment of DNA adjacent to the original position. Motivated by applications that store data in living organisms, Jain {\em et al.} (2016) proposed the study of codes that…

Combinatorics · Mathematics 2017-11-20 Yeow Meng Chee , Johan Chrisnata , Han Mao Kiah , Tuan Thanh Nguyen

A position $p$ in a word $w$ is critical if the minimal local period at $p$ is equal to the global period of $w$. According to the Critical Factorisation Theorem all words of length at least two have a critical point. We study the number…

Combinatorics · Mathematics 2021-07-21 Tero Harju

Finite alphabets of at least three letters permit the construction of square-free words of infinite length. We show that the entropy density is strictly positive and derive reasonable lower and upper bounds. Finally, we present an…

Mathematical Physics · Physics 2007-05-23 Michael Baake , Veit Elser , Uwe Grimm

A substring $u$ of a string $T$ is called a minimal unique substring (MUS) of $T$ if $u$ occurs exactly once in $T$ and any proper substring of $u$ occurs at least twice in $T$. A string $w$ is called a minimal absent word (MAW) of $T$ if…

Data Structures and Algorithms · Computer Science 2019-09-16 Takuya Mieno , Yuki Kuhara , Tooru Akagi , Yuta Fujishige , Yuto Nakashima , Shunsuke Inenaga , Hideo Bannai , Masayuki Takeda

The \emph{Hamming distance} $\text{ham}(u,v)$ between two equal-length words $u$, $v$ is the number of positions where $u$ and $v$ differ. The words $u$ and $v$ are said to be \emph{conjugates} if there exist non-empty words $x,y$ such that…

Combinatorics · Mathematics 2022-03-15 Daniel Gabric

A set X of partial words over a finite alphabet A is called unavoidable if every two-sided infinite word over A has a factor compatible with an element of X. Unlike the case of a set of words without holes, the problem of deciding whether…

Formal Languages and Automata Theory · Computer Science 2017-08-23 Joey Becker , F. Blanchet-Sadri , Laure Flapan , Stephen Watkins

We investigate the problem of the maximum number of cubic subwords (of the form $www$) in a given word. We also consider square subwords (of the form $ww$). The problem of the maximum number of squares in a word is not well understood.…

Formal Languages and Automata Theory · Computer Science 2015-05-14 Marcin Kubica , Jakub Radoszewski , Wojciech Rytter , Tomasz Walen

In 1976, Dekking showed that there exists an infinite binary word that contains neither squares yy with y >= 4 nor cubes xxx. We show that `cube' can be replaced by any fractional power > 5/2. We also consider the analogous problem where…

Combinatorics · Mathematics 2007-05-23 Jeffrey Shallit

A non-empty word $w$ is a border of the word $u$ if $\vert w\vert<\vert u\vert$ and $w$ is both a prefix and a suffix of $u$. A word $u$ with the border $w$ is closed if $u$ has exactly two occurrences of $w$. A word $u$ is privileged if…

Discrete Mathematics · Computer Science 2020-01-22 Josef Rukavicka
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