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Performing massive data mining experiments with multiple datasets and methods is a common task faced by most bioinformatics and computational biology laboratories. WEKA is a machine learning package designed to facilitate this task by…

Mathematical Software · Computer Science 2014-12-19 Madison Flannery , David M Budden , Alexandre Mendes

Simulation has become an essential component of designing and developing scientific experiments. The conventional procedural approach to coding simulations of complex experiments is often error-prone, hard to interpret, and inflexible,…

Computational Physics · Physics 2023-08-09 Peter Sun , John A. Marohn

As quantum computing advances from theoretical promise to experimental reality, the need for rigorous experiment tracking becomes critical. Drawing inspiration from best practices in machine learning (ML) and artificial intelligence (AI),…

Quantum Physics · Physics 2025-07-10 Mahee Gamage , Otso Kinanen , Jake Muff , Vlad Stirbu

Accessible machine learning algorithms, software, and diagnostic tools for energy-efficient devices and systems are extremely valuable across a broad range of application domains. In scientific domains, real-time near-sensor processing can…

Although the convergence of high-performance computing, automation, and machine learning has significantly altered the materials design timeline, transformative advances in functional materials and acceleration of their design will require…

Advanced manufacturing with new bio-derived materials can be achieved faster and more economically with first-principle-based artificial intelligence and machine learning (AI/ML)-derived models and process optimization. Not only is this…

Soft Condensed Matter · Physics 2026-02-20 Rigoberto Advincula , Jihua Chen

In reinforcement learning (RL) research, simulations enable benchmarks between algorithms, as well as prototyping and hyper-parameter tuning of agents. In order to promote RL both in research and real-world applications, frameworks are…

Robotics · Computer Science 2022-12-05 Christian Bitter , Timo Thun , Tobias Meisen

Data-intensive scientific workflows increasingly rely on high-performance computing (HPC) systems, complementing traditional Grid and Cloud platforms. However, workflow scheduling on HPC infrastructures remains challenging due to the…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-11-26 Aurelio Vivas , Harold Castro

Mechanical and thermodynamic properties, including the influence of crystal defects, are critical for evaluating materials in engineering applications. Molecular dynamics simulations provide valuable insight into these mechanisms at the…

The integration of machine learning (ML) into the physical sciences is reshaping computational paradigms, offering the potential to accelerate demanding simulations such as computational fluid dynamics (CFD). Yet, persistent challenges in…

With ever-increasing computational capabilities, robust and automated research workflows have become essential for orchestrating large numbers of interdependent simulations. However, significant technical expertise is still required to…

Motivation: Building and iterating machine learning models is often a resource-intensive process. In biomedical research, scientific codebases can lack scalability and are not easily transferable to work beyond what they were intended.…

Machine Learning · Computer Science 2025-04-03 Khoa A. Tran , John V. Pearson , Nicola Waddell

Measurement techniques such as Magnetic Resonance Velocimety (MRV) and Magnetic Resonance Concentration (MRC) are useful for obtaining 3D time-averaged flow quantities in complex turbulent flows, but cannot measure turbulent correlations or…

This paper presents a new open-source high-fidelity dataset for Machine Learning (ML) containing 355 geometric variants of the Windsor body, to help the development and testing of ML surrogate models for external automotive aerodynamics.…

With the growing demand for novel materials, machine learning-driven inverse design methods face significant challenges in reconciling the high-dimensional materials composition space with limited experimental data. Existing approaches…

Machine Learning · Computer Science 2025-07-02 Yeyong Yu , Xilei Bian , Jie Xiong , Xing Wu , Quan Qian

Currently, most multimodal studies are based on large language models (LLMs) with quadratic-complexity Transformer architectures. While linear models like RNNs enjoy low inference costs, their application has been largely limited to the…

Computation and Language · Computer Science 2025-05-21 Jiale Kang , Ziyin Yue , Qingyu Yin , Jiang Rui , Weile Li , Zening Lu , Zhouran Ji

The realization of novel technological opportunities given by computational and autonomous materials design requires efficient and effective frameworks. For more than two decades, aflow++ (Automatic-Flow Framework for Materials Discovery)…

Robotic designs played an important role in recent advances by providing powerful robots with complex mechanics. Many recent systems rely on parallel actuation to provide lighter limbs and allow more complex motion. However, these emerging…

Robotics · Computer Science 2025-04-11 Virgile Batto , Ludovic de Matteis , Nicolas Mansard

This work describes the selection approach and analysis of existing AutoML frameworks regarding their capability of a) incorporating Quantum Machine Learning (QML) algorithms into this automated solving approach of the AutoML framing and b)…

Machine Learning · Computer Science 2023-10-09 Dennis Klau , Marc Zöller , Christian Tutschku