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Interactive notebooks are a precious tool for creating graphical user interfaces and teaching materials. Python and Jupyter are becoming increasingly popular in this context, with Jupyter widgets at the core of the interactive…

Physics Education · Physics 2024-09-02 Dou Du , Taylor J. Baird , Kristjan Eimre , Sara Bonella , Giovanni Pizzi

In the Jupyter ecosystem, data visualization is usually done with "widgets" created as notebook cell outputs. While this mechanism works well in some circumstances, it is not well-suited to presenting interfaces that are long-lived,…

Instrumentation and Methods for Astrophysics · Physics 2022-12-09 Peter K. G. Williams , Jonathan Carifio , Henrik Norman , A. David Weigel

"Computational experiments" use code and interactive visualizations to convey mathematical and physical concepts in an intuitive way, and are increasingly used to support ex cathedra lecturing in scientific and engineering disciplines.…

Scatterplots are one of the simplest and most commonly-used visualizations for understanding quantitative, multidimensional data. However, since scatterplots only depict two attributes at a time, analysts often need to manually generate and…

Human-Computer Interaction · Computer Science 2019-07-30 Doris Jung-Lin Lee , Jaewoo Kim , Renxuan Wang , Aditya Parameswaran

The way in which data are shared can affect their utility and reusability. Here, we demonstrate how data that we had previously shared in bulk can be mobilized further through a knowledge graph that allows for much more granular exploration…

Computational Engineering, Finance, and Science · Computer Science 2025-01-07 Sheeba Samuel , Daniel Mietchen

The advent of increasingly large and complex datasets has fundamentally altered the way that scientists conduct astronomy research. The need to work closely to the data has motivated the creation of online science platforms, which include a…

Instrumentation and Methods for Astrophysics · Physics 2021-04-15 Stéphanie Juneau , Knut A. G. Olsen , Robert Nikutta , Alice Jacques , Stephen Bailey

Jupyter Notebooks have become a mainstream tool for interactive computing in every field of science. Jupyter Notebooks are suitable as companion applications for Science Gateways, providing more flexibility and post-processing capability to…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-07-26 Andrea Zonca , Robert S. Sinkovits

Computational notebooks such as Jupyter are popular for exploratory data analysis and insight finding. Despite the module-based structure, notebooks visually appear as a single thread of interleaved cells containing text, code,…

Human-Computer Interaction · Computer Science 2023-08-22 Chen Chen , Jane Hoffswell , Shunan Guo , Ryan Rossi , Yeuk-Yin Chan , Fan Du , Eunyee Koh , Zhicheng Liu

ESCAPE is a free python package and framework for creating applications for simulating and fitting of X-ray and neutron scattering data with current support for specular reflectivity, polarized neutron reflectometry, high resolution X-ray…

Computational Engineering, Finance, and Science · Computer Science 2020-11-11 Denis Korolkov , Stepan Rakhimov

This paper describes a new benchmark tool, Spatter, for assessing memory system architectures in the context of a specific category of indexed accesses known as gather and scatter. These types of operations are increasingly used to express…

Performance · Computer Science 2020-07-09 Patrick Lavin , Jeffrey Young , Jason Riedy , Richard Vuduc , Aaron Vose , Dan Ernst

Overplotting of data points is a common problem when visualizing large datasets in a scatterplot, particularly when mapping nominal dimensions to one of the scatterplot axes. Transparency, aggregation, and jittering have previously been…

Human-Computer Interaction · Computer Science 2017-08-29 Deokgun Park , Sung-Hee Kim , Niklas Elmqvist

Jupyter notebooks has emerged as a standard tool for data science programming. Programs in Jupyter notebooks are different from typical programs as they are constructed by a collection of code snippets interleaved with text and…

Software Engineering · Computer Science 2021-03-02 Malin Källén , Tobias Wrigstad

The desktop GUI catalogue analysis tool TOPCAT, and its command-line counterpart STILTS, offer among other capabilities visual exploration of locally stored tables containing millions of rows or more. They offer many variations on the theme…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-12-22 Mark Taylor

As scientific work becomes more computational and data intensive, research processes and results become more difficult to interpret and reproduce. In this poster, we show how the Jupyter notebook, a tool originally designed as a free…

Digital Libraries · Computer Science 2018-04-17 Bernadette M. Boscoe , Irene V. Pasquetto , Milena S. Golshan , Christine L. Borgman

This paper explores the point set representation for tubular structure extraction tasks. Compared with the traditional mask representation, the point set representation enjoys its flexibility and representation ability, which would not be…

Computer Vision and Pattern Recognition · Computer Science 2022-09-14 Dong Wang , Zhao Zhang , Ziwei Zhao , Yuhang Liu , Yihong Chen , Liwei Wang

This paper proposes the usage of \emph{visualisation widgets} for exploratory search with \emph{sentiment} as a facet. Starting from specific design goals for depiction of ambivalence in sentiment, two visualization widgets were…

Human-Computer Interaction · Computer Science 2016-01-12 Eduardo Graells-Garrido , Mounia Lalmas , Ricardo Baeza-Yates

Keeping abreast of current trends, technologies, and best practices in visualization and data analysis is becoming increasingly difficult, especially for fledgling data scientists. In this paper, we propose Lodestar, an interactive…

Human-Computer Interaction · Computer Science 2022-04-19 Deepthi Raghunandan , Zhe Cui , Kartik Krishnan , Segen Tirfe , Shenzhi Shi , Tejaswi Darshan Shrestha , Leilani Battle , Niklas Elmqvist

Scientific workflows facilitate computational, data manipulation, and sometimes visualization steps for scientific data analysis. They are vital for reproducing and validating experiments, usually involving computational steps in scientific…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-11-22 Jinli Duan , Shasha Dennis

Computational notebooks, such as Jupyter Notebook, have become data scientists' de facto programming environments. Many visualization researchers and practitioners have developed interactive visualization tools that support notebooks, yet…

Human-Computer Interaction · Computer Science 2024-04-01 Zijie J. Wang , David Munechika , Seongmin Lee , Duen Horng Chau

Scientific data sets continue to increase in both size and complexity. In the past, dedicated graphics systems at supercomputing centers were required to visualize large data sets, but as the price of commodity graphics hardware has dropped…

Instrumentation and Methods for Astrophysics · Physics 2015-05-19 P. R. Gazis , C. Levit , M. J. Way
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