English
Related papers

Related papers: HIGHT: Hierarchical Graph Tokenization for Molecul…

200 papers

Large Vision-Language Models (LVLMs) bridge the gap between visual and linguistic modalities, demonstrating strong potential across a variety of domains. However, despite significant progress, LVLMs still suffer from severe hallucination…

Computer Vision and Pattern Recognition · Computer Science 2025-12-23 Ruiqi Ma , Yu Yan , Chunhong Zhang , Minghao Yin , XinChao Liu , Zhihong Jin , Zheng Hu

With the rapid advancement of large language models (LLMs), classic graph learning tasks have greatly benefited from LLMs, including improved encoding of textual features, more efficient construction of graphs from text, and enhanced…

Artificial Intelligence · Computer Science 2026-05-05 Xiyuan Wang , Yi Hu , Yanbo Wang , Chuan Shi , Muhan Zhang

Molecular property prediction has gained significant attention due to its transformative potential in multiple scientific disciplines. Conventionally, a molecule graph can be represented either as a graph-structured data or a SMILES text.…

Machine Learning · Computer Science 2023-07-17 Chen Qian , Huayi Tang , Zhirui Yang , Hong Liang , Yong Liu

Molecule-and-text cross-modal representation learning has emerged as a promising direction for enhancing the quality of molecular representation, thereby improving performance in various scientific fields. However, most approaches employ a…

Quantitative Methods · Quantitative Biology 2025-03-04 Yikun Zhang , Geyan Ye , Chaohao Yuan , Bo Han , Long-Kai Huang , Jianhua Yao , Wei Liu , Yu Rong

Reading comprehension is a fundamental skill in human cognitive development. With the advancement of Large Language Models (LLMs), there is a growing need to compare how humans and LLMs understand language across different contexts and…

Computation and Language · Computer Science 2025-07-17 Yuhong Zhang , Jialu Li , Shilai Yang , Yuchen Xu , Gert Cauwenberghs , Tzyy-Ping Jung

Large Language Models (LLMs) are increasingly used in various contexts, yet remain prone to generating non-factual content, commonly referred to as "hallucinations". The literature categorizes hallucinations into several types, including…

Computation and Language · Computer Science 2025-03-12 Samir Abdaljalil , Hasan Kurban , Erchin Serpedin

Recent studies have shown that Large Language Models (LLMs) can achieve strong reasoning performance by incorporating functional symbolic representations that abstractly describe graph traversal algorithms and step-by-step reasoning in…

Artificial Intelligence · Computer Science 2026-05-28 Phuong Minh Nguyen , Tien Huu Dang , Naoya Inoue

Recent research has demonstrated the effectiveness of large language models (LLMs) in solving combinatorial optimization problems (COPs) by representing tasks and instances in natural language. However, purely language-based approaches…

Artificial Intelligence · Computer Science 2026-03-31 Shaodi Feng , Zhuoyi Lin , Yaoxin Wu , Haiyan Yin , Yan Jin , Senthilnath Jayavelu , Xun Xu

Self-supervised representation learning has been highly promising for histopathology image analysis with numerous approaches leveraging their patient-slide-patch hierarchy to learn better representations. In this paper, we explore how the…

Computer Vision and Pattern Recognition · Computer Science 2024-03-22 Hasindri Watawana , Kanchana Ranasinghe , Tariq Mahmood , Muzammal Naseer , Salman Khan , Fahad Shahbaz Khan

Hierarchical Imitation Learning (HIL) is a promising approach for tackling long-horizon decision-making tasks. While it is a challenging task due to the lack of detailed supervisory labels for sub-goal learning, and reliance on hundreds to…

Artificial Intelligence · Computer Science 2024-10-04 Chengyang Gu , Yuxin Pan , Haotian Bai , Hui Xiong , Yize Chen

Obtaining a single-vector representation from a Large Language Model's (LLM) token-level outputs is a critical step for nearly all sentence-level tasks. However, standard pooling methods like mean or max aggregation treat tokens as an…

Machine Learning · Computer Science 2026-03-05 Krishna Sri Ipsit Mantri , Carola-Bibiane Schönlieb , Zorah Lähner , Moshe Eliasof

Molecular language modeling tasks such as molecule captioning have been recognized for their potential to further understand molecular properties that can aid drug discovery or material synthesis based on chemical reactions. Unlike the…

Machine Learning · Computer Science 2025-03-12 Sangyeup Kim , Nayeon Kim , Yinhua Piao , Sun Kim

In many reasoning tasks, large language models (LLMs) rely on structured external knowledge, such as graphs and tables, which is typically linearized into sequential token representations. However, even when sufficient knowledge is…

Computation and Language · Computer Science 2026-05-27 Shanghao Li , Jinda Han , Yibo Wang , Yuanjie Zhu , Zihe Song , Langzhou He , Kenan Kamel A Alghythee , Philip S. Yu

Hallucinations remain a major obstacle for large language models (LLMs), especially in safety-critical domains. We present HALT (Hallucination Assessment via Log-probs as Time series), a lightweight hallucination detector that leverages…

Computation and Language · Computer Science 2026-02-04 Ahmad Shapiro , Karan Taneja , Ashok Goel

Despite their impressive ability to generate high-quality and fluent text, generative large language models (LLMs) also produce hallucinations: statements that are misaligned with established world knowledge or provided input context.…

Computation and Language · Computer Science 2025-01-15 Abhilasha Ravichander , Shrusti Ghela , David Wadden , Yejin Choi

Large language models (LLMs) can generate fluent natural language texts when given relevant documents as background context. This ability has attracted considerable interest in developing industry applications of LLMs. However, LLMs are…

Computation and Language · Computer Science 2023-10-11 Deren Lei , Yaxi Li , Mengya Hu , Mingyu Wang , Vincent Yun , Emily Ching , Eslam Kamal

Multi-modal large language models (MLLMs) have been shown to efficiently integrate natural language with visual information to handle multi-modal tasks. However, MLLMs still face a fundamental limitation of hallucinations, where they tend…

Computer Vision and Pattern Recognition · Computer Science 2024-02-27 Chaoya Jiang , Haiyang Xu , Mengfan Dong , Jiaxing Chen , Wei Ye , Ming Yan , Qinghao Ye , Ji Zhang , Fei Huang , Shikun Zhang

We proposed the molecular hyper-message passing network (MolHMPN) that predicts the properties of a molecule with prior knowledge-guided subgraph. Modeling higher-order connectivities in molecules is necessary as changes in both the…

Computational Engineering, Finance, and Science · Computer Science 2022-01-05 Fangying Chen , Junyoung Park , Jinkyoo Park

Although Large Visual Language Models (LVLMs) have demonstrated exceptional abilities in understanding multimodal data, they invariably suffer from hallucinations, leading to a disconnect between the generated text and the corresponding…

Computer Vision and Pattern Recognition · Computer Science 2025-04-02 Xinyu Lyu , Beitao Chen , Lianli Gao , Jingkuan Song , Heng Tao Shen

As they carry great potential for modeling complex interactions, graph neural network (GNN)-based methods have been widely used to predict quantum mechanical properties of molecules. Most of the existing methods treat molecules as molecular…

Machine Learning · Computer Science 2020-09-29 Zeren Shui , George Karypis