English
Related papers

Related papers: HIGHT: Hierarchical Graph Tokenization for Molecul…

200 papers

Understanding linguistics and morphology of resource-scarce code-mixed texts remains a key challenge in text processing. Although word embedding comes in handy to support downstream tasks for low-resource languages, there are plenty of…

Computation and Language · Computer Science 2021-06-01 Ayan Sengupta , Sourabh Kumar Bhattacharjee , Tanmoy Chakraborty , Md Shad Akhtar

While existing hierarchical text classification (HTC) methods attempt to capture label hierarchies for model training, they either make local decisions regarding each label or completely ignore the hierarchy information during inference. To…

Information Retrieval · Computer Science 2020-06-19 Yuning Mao , Jingjing Tian , Jiawei Han , Xiang Ren

Large language models (LLMs) have demonstrated their instruction-following capabilities and achieved powerful performance on various tasks. Inspired by their success, recent works in the molecular domain have led to the development of large…

Artificial Intelligence · Computer Science 2026-01-21 Jinyoung Park , Minseong Bae , Jeehye Na , Hyunwoo J. Kim

Significant efforts have been dedicated to integrating the powerful Large Language Models (LLMs) with diverse modalities, particularly focusing on the fusion of language, vision and audio data. However, the graph-structured data, which is…

Computation and Language · Computer Science 2024-12-31 Zipeng Liu , Likang Wu , Ming He , Zhong Guan , Hongke Zhao , Nan Feng

Large Language Models (LLMs) have advanced machine translation but remain vulnerable to hallucinations. Unfortunately, existing MT benchmarks are not capable of exposing failures in multilingual LLMs. To disclose hallucination in…

Computation and Language · Computer Science 2025-10-29 Xinwei Wu , Heng Liu , Jiang Zhou , Xiaohu Zhao , Linlong Xu , Longyue Wang , Weihua Luo , Kaifu Zhang

In recent years, efforts have been made to use text information for better user profiling and item characterization in recommendations. However, text information can sometimes be of low quality, hindering its effectiveness for real-world…

Artificial Intelligence · Computer Science 2024-02-15 Yingpeng Du , Ziyan Wang , Zhu Sun , Haoyan Chua , Hongzhi Liu , Zhonghai Wu , Yining Ma , Jie Zhang , Youchen Sun

Developing an effective molecular generation framework even with a limited number of molecules is often important for its practical deployment, e.g., drug discovery, since acquiring task-related molecular data requires expensive and…

Machine Learning · Computer Science 2024-07-17 Seojin Kim , Jaehyun Nam , Sihyun Yu , Younghoon Shin , Jinwoo Shin

Sign language translation (SLT), which generates text in a spoken language from visual content in a sign language, is important to assist the hard-of-hearing community for their communications. Inspired by neural machine translation (NMT),…

Computer Vision and Pattern Recognition · Computer Science 2021-11-16 Jichao Kan , Kun Hu , Markus Hagenbuchner , Ah Chung Tsoi , Mohammed Bennamounm , Zhiyong Wang

Graph Masked Autoencoders (GMAEs) have emerged as a notable self-supervised learning approach for graph-structured data. Existing GMAE models primarily focus on reconstructing node-level information, categorizing them as single-scale GMAEs.…

Machine Learning · Computer Science 2026-03-19 Chuang Liu , Zelin Yao , Xueqi Ma , Mukun Chen , Luzhi Wang , Jia Wu , Wenbin Hu

Tokenization is the first - and often underappreciated - layer of computation in language models. While Chain-of-Thought (CoT) prompting enables transformer models to approximate recurrent computation by externalizing intermediate steps, we…

Computation and Language · Computer Science 2025-05-21 Xiang Zhang , Juntai Cao , Jiaqi Wei , Yiwei Xu , Chenyu You

Large Language Models (LLMs) have inherent limitations of faithfulness and factuality, commonly referred to as hallucinations. Several benchmarks have been developed that provide a test bed for factuality evaluation within the context of…

Computation and Language · Computer Science 2025-10-24 Ernests Lavrinovics , Russa Biswas , Katja Hose , Johannes Bjerva

Do current large language models (LLMs) better solve graph reasoning and generation tasks with parameter updates? In this paper, we propose InstructGraph, a framework that empowers LLMs with the abilities of graph reasoning and generation…

Computation and Language · Computer Science 2024-02-15 Jianing Wang , Junda Wu , Yupeng Hou , Yao Liu , Ming Gao , Julian McAuley

(Renyi Qu's Master's Thesis) Recent advancements in interpretable models for vision-language tasks have achieved competitive performance; however, their interpretability often suffers due to the reliance on unstructured text outputs from…

Computer Vision and Pattern Recognition · Computer Science 2024-06-04 Renyi Qu , Mark Yatskar

The advancement of Large Language Models (LLMs) enables flexible and interpretable automatic evaluations. In the field of machine translation evaluation, utilizing LLMs with translation error annotations based on Multidimensional Quality…

Computation and Language · Computer Science 2025-09-17 Shijie Zhang , Renhao Li , Songsheng Wang , Philipp Koehn , Min Yang , Derek F. Wong

Large language models (LLMs) have shown remarkable performance in various natural language processing tasks. However, a primary constraint they face is the context limit, i.e., the maximum number of tokens they can process. Previous works…

Machine Learning · Computer Science 2024-04-17 Woomin Song , Seunghyuk Oh , Sangwoo Mo , Jaehyung Kim , Sukmin Yun , Jung-Woo Ha , Jinwoo Shin

Recent advancements in multimodal large language models (MLLMs) have shown unprecedented capabilities in advancing various vision-language tasks. However, MLLMs face significant challenges with hallucinations, and misleading outputs that do…

Computer Vision and Pattern Recognition · Computer Science 2024-12-24 Shengqiong Wu , Hao Fei , Liangming Pan , William Yang Wang , Shuicheng Yan , Tat-Seng Chua

Large Language Models (LLMs) have revolutionized Natural Language Processing (NLP) based applications including automated text generation, question answering, chatbots, and others. However, they face a significant challenge: hallucinations,…

Computation and Language · Computer Science 2024-11-22 Ernests Lavrinovics , Russa Biswas , Johannes Bjerva , Katja Hose

Molecular representation learning methods typically tokenize molecules as individual atoms or use rigid, rule-based fragment decompositions, limiting their ability to capture meaningful chemical substructure context. We introduce…

Machine Learning · Computer Science 2026-05-26 Ankur Samanta , Rohan Gupta , Aditi Misra , Christian McIntosh Clarke , Jayakumar Rajadas

When asked to summarize articles or answer questions given a passage, large language models (LLMs) can hallucinate details and respond with unsubstantiated answers that are inaccurate with respect to the input context. This paper describes…

Computation and Language · Computer Science 2024-10-04 Yung-Sung Chuang , Linlu Qiu , Cheng-Yu Hsieh , Ranjay Krishna , Yoon Kim , James Glass

Molecules are graphs, but large language models~(LLMs) are usually asked to reason about them through linear strings. The most popular molecular representation, SMILES, compresses atoms, bonds, branches and rings into a compact sequence in…

Biomolecules · Quantitative Biology 2026-05-19 Zhiyuan Yan , Chen Liu , Boxuan Zhao , Kaiqing Lin , Jixiang Zhao , Yimi Wang , Liuzhenghao Lv , Hao Li , Shanzhuo Zhang , Li Yuan , Fanyang Mo