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Related papers: Peptide Vaccine Design by Evolutionary Multi-Objec…

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Drones are effective for reducing human activity and interactions by performing tasks such as exploring and inspecting new environments, monitoring resources and delivering packages. Drones need a controller to maintain stability and to…

Systems and Control · Electrical Eng. & Systems 2021-05-19 Azin Shamshirgaran , Hamed Javidi , Dan Simon

The performance of evolutionary algorithms can be heavily undermined when constraints limit the feasible areas of the search space. For instance, while Covariance Matrix Adaptation Evolution Strategy is one of the most efficient algorithms…

Neural and Evolutionary Computing · Computer Science 2018-10-08 A. Maesani , G. Iacca , D. Floreano

In the field of evolutionary multiobjective optimization, the decision maker (DM) concerns conflicting objectives. In the real-world applications, there usually exist more than one DM and each DM concerns parts of these objectives.…

Neural and Evolutionary Computing · Computer Science 2022-07-28 Zeneng She , Wenjian Luo , Xin Lin , Yatong Chang , Yuhui Shi

Directed evolution is a versatile technique in protein engineering that mimics the process of natural selection by iteratively alternating between mutagenesis and screening in order to search for sequences that optimize a given property of…

Biomolecules · Quantitative Biology 2024-05-02 Lixue Cheng , Ziyi Yang , Changyu Hsieh , Benben Liao , Shengyu Zhang

Mixed-precision quantization is a powerful tool to enable memory and compute savings of neural network workloads by deploying different sets of bit-width precisions on separate compute operations. In this work, we present a flexible and…

Neural and Evolutionary Computing · Computer Science 2022-04-05 Santiago Miret , Vui Seng Chua , Mattias Marder , Mariano Phielipp , Nilesh Jain , Somdeb Majumdar

Antibodies are Y-shaped proteins that neutralize pathogens and constitute the core of our adaptive immune system. De novo generation of new antibodies that target specific antigens holds the key to accelerating vaccine discovery. However,…

Machine Learning · Computer Science 2023-06-05 Yogesh Verma , Markus Heinonen , Vikas Garg

When addressing the challenge of complex multi-objective optimization problems, particularly those with non-convex and non-uniform Pareto fronts, Decomposition-based Multi-Objective Evolutionary Algorithms (MOEADs) often converge to local…

Neural and Evolutionary Computing · Computer Science 2024-04-15 Ting Dong , Haoxin Wang , Hengxi Zhang , Wenbo Ding

Computing diverse sets of high quality solutions for a given optimization problem has become an important topic in recent years. In this paper, we introduce a coevolutionary Pareto Diversity Optimization approach which builds on the success…

Neural and Evolutionary Computing · Computer Science 2022-04-13 Aneta Neumann , Denis Antipov , Frank Neumann

This article introduces an enhanced particle swarm optimizer (PSO), termed Orthogonal PSO with Mutation (OPSO-m). Initially, it proposes an orthogonal array-based learning approach to cultivate an improved initial swarm for PSO,…

Neural and Evolutionary Computing · Computer Science 2024-05-22 Indu Bala , Dikshit Chauhan , Lewis Mitchell

The design space of networked embedded systems is very large, posing challenges to the optimisation of such platforms when it comes to support applications with real-time guarantees. Recent research has shown that a number of inter-related…

Performance · Computer Science 2020-07-21 Leandro Soares Indrusiak , Robert I. Davis , Piotr Dziurzanski

As a cornerstone in the Evolutionary Computation (EC) domain, Differential Evolution (DE) is known for its simplicity and effectiveness in handling challenging black-box optimization problems. While the advantages of DE are well-recognized,…

Neural and Evolutionary Computing · Computer Science 2025-03-27 Minyang Chen , Chenchen Feng , and Ran Cheng

Decomposition has been the mainstream approach in classic mathematical programming for multi-objective optimization and multi-criterion decision-making. However, it was not properly studied in the context of evolutionary multi-objective…

Neural and Evolutionary Computing · Computer Science 2024-10-23 Ke Li

Deep learning holds a big promise for optimizing existing peptides with more desirable properties, a critical step towards accelerating new drug discovery. Despite the recent emergence of several optimized Antimicrobial peptides(AMP)…

Quantitative Methods · Quantitative Biology 2024-06-06 Li Wang , Xiangzheng Fu , Jiahao Yang , Xinyi Zhang , Xiucai Ye , Yiping Liu , Tetsuya Sakurai , Xiangxiang Zeng

Optimal experimental design (OED) concerns itself with identifying ideal methods of data collection, e.g.~via sensor placement. The \emph{greedy algorithm}, that is, placing one sensor at a time, in an iteratively optimal manner, stands as…

Optimization and Control · Mathematics 2025-10-15 Christian Aarset

Classifiers are often utilized in time-constrained settings where labels must be assigned to inputs quickly. To address these scenarios, budgeted multi-stage classifiers (MSC) process inputs through a sequence of partial feature acquisition…

Neural and Evolutionary Computing · Computer Science 2021-12-06 Nolan H. Hamilton , Errin W. Fulp

For the purpose of addressing the multi-objective optimal reactive power dispatch (MORPD) problem, a two-step approach is proposed in this paper. First of all, to ensure the economy and security of the power system, the MORPD model aiming…

Optimization and Control · Mathematics 2020-03-06 Meng Zhang , Yang Li

Preferential Bayesian optimization (PBO) is a framework for optimizing a decision-maker's latent preferences over available design choices. While preferences often involve multiple conflicting objectives, existing work in PBO assumes that…

Machine Learning · Computer Science 2024-06-24 Raul Astudillo , Kejun Li , Maegan Tucker , Chu Xin Cheng , Aaron D. Ames , Yisong Yue

Knowledge transfer-based evolutionary optimization has garnered significant attention, such as in multi-task evolutionary optimization (MTEO), which aims to solve complex problems by simultaneously optimizing multiple tasks. While this…

Neural and Evolutionary Computing · Computer Science 2025-10-10 Jie Zhao , Kang Hao Cheong , Yaochu Jin

Target-specific peptides, such as conotoxins, exhibit exceptional binding affinity and selectivity toward ion channels and receptors. However, their therapeutic potential remains underutilized due to the limited diversity of natural…

Biomolecules · Quantitative Biology 2025-05-07 Cheng Ge , Han-Shen Tae , Zhenqiang Zhang , Lu Lu , Zhijie Huang , Yilin Wang , Tao Jiang , Wenqing Cai , Shan Chang , David J. Adams , Rilei Yu

VLSI mask optimization is one of the most critical stages in manufacturability aware design, which is costly due to the complicated mask optimization and lithography simulation. Recent researches have shown prominent advantages of machine…

Machine Learning · Computer Science 2019-12-17 Haoyu Yang , Wei Zhong , Yuzhe Ma , Hao Geng , Ran Chen , Wanli Chen , Bei Yu
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