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The irreducible complexity of natural phenomena has led Graph Neural Networks to be employed as a standard model to perform representation learning tasks on graph-structured data. While their capacity to capture local and global patterns is…

Machine Learning · Computer Science 2024-02-13 Lorenzo Giusti

Low-dimensional embeddings are essential for machine learning tasks involving graphs, such as node classification, link prediction, community detection, network visualization, and network compression. Although recent studies have identified…

Machine Learning · Computer Science 2025-03-04 Nikolaos Nakis , Niels Raunkjær Holm , Andreas Lyhne Fiehn , Morten Mørup

In a world abundant with diverse data arising from complex acquisition techniques, there is a growing need for new data analysis methods. In this paper we focus on high-dimensional data that are organized into several hierarchical datasets.…

Machine Learning · Computer Science 2021-04-06 Lior Aloni , Omer Bobrowski , Ronen Talmon

This paper proposes a novel topological learning framework that integrates networks of different sizes and topology through persistent homology. Such challenging task is made possible through the introduction of a computationally efficient…

Neurons and Cognition · Quantitative Biology 2023-01-30 Tananun Songdechakraiwut , Moo K. Chung

Topology applied to real world data using persistent homology has started to find applications within machine learning, including deep learning. We present a differentiable topology layer that computes persistent homology based on level set…

Modeling distributed computing in a way enabling the use of formal methods is a challenge that has been approached from different angles, among which two techniques emerged at the turn of the century: protocol complexes, and directed…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-03-21 Pierre Fraigniaud , Ami Paz

Network (or Graph) Alignment Algorithms aims to reveal structural similarities among graphs. In particular Local Network Alignment Algorithms (LNAs) finds local regions of similarity among two or more networks. Such algorithms are in…

Social and Information Networks · Computer Science 2020-08-12 Pietro Hiram Guzzi

An embedding is a mapping from a set of nodes of a network into a real vector space. Embeddings can have various aims like capturing the underlying graph topology and structure, node-to-node relationship, or other relevant information about…

Machine Learning · Computer Science 2023-06-21 Ashkan Dehghan , Kinga Siuta , Agata Skorupka , Andrei Betlen , David Miller , Bogumil Kaminski , Pawel Pralat

Networked structure emerged from a wide range of fields such as biological systems, World Wide Web and technological infrastructure. A deeply insight into the topological complexity of these networks has been gained. Some works start to pay…

Physics and Society · Physics 2012-02-03 Jiang Xiongfei

Hyperbolic neural networks have been popular in the recent past due to their ability to represent hierarchical data sets effectively and efficiently. The challenge in developing these networks lies in the nonlinearity of the embedding space…

Machine Learning · Computer Science 2021-12-08 Xiran Fan , Chun-Hao Yang , Baba C. Vemuri

In the framework of on nonassociative geometry, we introduce a new effective model that extends the statistical treatment of complex networks with hidden geometry. The small-world property of the network is controlled by nonlocal curvature…

Physics and Society · Physics 2020-03-11 Alexander I. Nesterov , Pablo Héctor Mata Villafuerte

Deep learning models have achieved remarkable success across various domains, yet their learned representations and decision-making processes remain largely opaque and hard to interpret. This work introduces HOLE (Homological Observation of…

Machine Learning · Computer Science 2026-04-08 Sudhanva Manjunath Athreya , Paul Rosen

Network embedding is an effective technique to learn the low-dimensional representations of nodes in networks. Real-world networks are usually with multiplex or having multi-view representations from different relations. Recently, there has…

Machine Learning · Computer Science 2022-03-08 Qifan Wang , Yi Fang , Anirudh Ravula , Ruining He , Bin Shen , Jingang Wang , Xiaojun Quan , Dongfang Liu

From data centers to IoT devices to Internet-based applications, overlay networks have become an important part of modern computing. Many of these overlay networks operate in fragile environments where processes are susceptible to faults…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-09-30 Andrew Berns

Inferring network topology from smooth signals is a significant problem in data science and engineering. A common challenge in real-world scenarios is the availability of only partially observed nodes. While some studies have considered…

Machine Learning · Computer Science 2025-07-08 Chuansen Peng , Hanning Tang , Zhiguo Wang , Xiaojing Shen

We study the effects of spatial constraints on the structural properties of networks embedded in one or two dimensional space. When nodes are embedded in space, they have a well defined Euclidean distance $r$ between any pair. We assume…

Physics and Society · Physics 2009-11-13 Kosmas Kosmidis , Shlomo Havlin , Armin Bunde

Computer networks are the foundation of modern digital infrastructure, facilitating global communication and data exchange. As demand for reliable high-bandwidth connectivity grows, advanced network modeling techniques become increasingly…

Graph representation learning in Euclidean space, despite its widespread adoption and proven utility in many domains, often struggles to effectively capture the inherent hierarchical and complex relational structures prevalent in real-world…

Machine Learning · Computer Science 2025-08-26 Menglin Yang , Min Zhou , Tong Zhang , Jiahong Liu , Zhihao Li , Lujia Pan , Hui Xiong , Irwin King

The design of periodic nanostructures allows to tailor the transport of photons, phonons, and matter waves for specific applications. Recent years have seen a further expansion of this field by engineering topological properties. However,…

Mesoscale and Nanoscale Physics · Physics 2021-06-16 Vittorio Peano , Florian Sapper , Florian Marquardt

Many real-world complex systems, such as epidemic spreading networks and ecosystems, can be modeled as networked dynamical systems that produce multivariate time series. Learning the intrinsic dynamics from observational data is pivotal for…

Machine Learning · Computer Science 2024-12-30 Yanna Ding , Zijie Huang , Malik Magdon-Ismail , Jianxi Gao
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