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We present a novel algorithm for Fast Registration Of image Groups (FROG), applied to large 3D image groups. Our approach extracts 3D SURF keypoints from images, computes matched pairs of keypoints and registers the group by minimizing pair…

Computer Vision and Pattern Recognition · Computer Science 2019-09-27 Rémi Agier , Sébastien Valette , Razmig Kéchichian , Laurent Fanton , Rémy Prost

In neuroimaging analysis, fMRI can well assess the function changes for brain diseases with no obvious structural lesions. To date, most deep-learning-based fMRI studies have employed functional connectivity (FC) as the basic feature for…

Image and Video Processing · Electrical Eng. & Systems 2023-03-03 Wei Dai , Ziyao Zhang , Lixia Tian , Shengyuan Yu , Shuhui Wang , Zhao Dong , Hairong Zheng

Accurate intraoperative image guidance is critical for achieving maximal safe resection in brain tumor surgery, yet neuronavigation systems based on preoperative MRI lose accuracy during the procedure due to brain shift. Aligning…

Computer Vision and Pattern Recognition · Computer Science 2025-11-18 Reuben Dorent , Laura Rigolo , Colin P. Galvin , Junyu Chen , Mattias P. Heinrich , Aaron Carass , Olivier Colliot , Demian Wassermann , Alexandra Golby , Tina Kapur , William Wells

We introduce a strategy for learning image registration without acquired imaging data, producing powerful networks agnostic to contrast introduced by magnetic resonance imaging (MRI). While classical registration methods accurately estimate…

Image and Video Processing · Electrical Eng. & Systems 2022-03-04 Malte Hoffmann , Benjamin Billot , Douglas N. Greve , Juan Eugenio Iglesias , Bruce Fischl , Adrian V. Dalca

Performing volumetric image processing directly within the browser, particularly with medical data, presents unprecedented challenges compared to conventional backend tools. These challenges arise from limitations inherent in browser…

Machine Learning · Computer Science 2023-10-26 Mohamed Masoud , Pratyush Reddy , Farfalla Hu , Sergey Plis

Image registration, a critical process in medical imaging, involves aligning different sets of medical imaging data into a single unified coordinate system. Deep learning networks, such as the Convolutional Neural Network (CNN)-based…

Computer Vision and Pattern Recognition · Computer Science 2024-04-16 Ziyang Wang , Jian-Qing Zheng , Chao Ma , Tao Guo

Retinal image registration plays an important role in the ophthalmological diagnosis process. Since there exist variances in viewing angles and anatomical structures across different retinal images, keypoint-based approaches become the…

Computer Vision and Pattern Recognition · Computer Science 2024-10-17 Yepeng Liu , Baosheng Yu , Tian Chen , Yuliang Gu , Bo Du , Yongchao Xu , Jun Cheng

Developing personalized computational models of the human brain remains a challenge for patient-specific clinical applications and neuroscience research. Efficient and accurate biophysical simulations rely on high-quality personalized…

Computational Engineering, Finance, and Science · Computer Science 2025-03-04 Andy Huynh , Benjamin Zwick , Michael Halle , Adam Wittek , Karol Miller

Multimodal groupwise registration aligns internal structures in a group of medical images. Current approaches to this problem involve developing similarity measures over the joint intensity profile of all images, which may be…

Computer Vision and Pattern Recognition · Computer Science 2022-12-13 Xin Wang , Xinzhe Luo , Xiahai Zhuang

We present USLR, a computational framework for longitudinal registration of brain MRI scans to estimate nonlinear image trajectories that are smooth across time, unbiased to any timepoint, and robust to imaging artefacts. It operates on the…

Image and Video Processing · Electrical Eng. & Systems 2023-11-15 Adrià Casamitjana , Roser Sala-Llonch , Karim Lekadir , Juan Eugenio Iglesias

Intraoperative registration of real-time ultrasound (iUS) to preoperative Magnetic Resonance Imaging (MRI) remains an unsolved problem due to severe modality-specific differences in appearance, resolution, and field-of-view. To address…

Computer Vision and Pattern Recognition · Computer Science 2026-04-02 Daniil Morozov , Reuben Dorent , Nazim Haouchine

Rigid registration aims to determine the translations and rotations necessary to align features in a pair of images. While recent machine learning methods have become state-of-the-art for linear and deformable registration across subjects,…

Image and Video Processing · Electrical Eng. & Systems 2025-12-08 Jingru Fu , Adrian V. Dalca , Bruce Fischl , Rodrigo Moreno , Malte Hoffmann

Multimodal magnetic resonance imaging (MRI) constitutes the first line of investigation for clinicians in the care of brain tumors, providing crucial insights for surgery planning, treatment monitoring, and biomarker identification.…

Computer Vision and Pattern Recognition · Computer Science 2025-08-26 Lucas Robinet , Ahmad Berjaoui , Elizabeth Cohen-Jonathan Moyal

Building a joint face-skull morphable model holds great potential for applications such as remote diagnostics, surgical planning, medical education, and physically based facial simulation. However, realizing this vision is constrained by…

Computer Vision and Pattern Recognition · Computer Science 2025-09-30 Zidu Wang , Meng Xu , Miao Xu , Hengyuan Ma , Jiankuo Zhao , Xutao Li , Xiangyu Zhu , Zhen Lei

Longitudinal brain analysis is essential for understanding healthy aging and identifying pathological deviations. Longitudinal registration of sequential brain MRI underpins such analyses. However, existing methods are limited by reliance…

Image and Video Processing · Electrical Eng. & Systems 2026-03-31 Bailiang Jian , Jiazhen Pan , Yitong Li , Fabian Bongratz , Ruochen Li , Daniel Rueckert , Benedikt Wiestler , Christian Wachinger

In the last decade, convolutional neural networks (ConvNets) have been a major focus of research in medical image analysis. However, the performances of ConvNets may be limited by a lack of explicit consideration of the long-range spatial…

Image and Video Processing · Electrical Eng. & Systems 2022-10-18 Junyu Chen , Eric C. Frey , Yufan He , William P. Segars , Ye Li , Yong Du

Editing images with instructions to reflect non-rigid motions, camera viewpoint shifts, object deformations, human articulations, and complex interactions, poses a challenging yet underexplored problem in computer vision. Existing…

Computer Vision and Pattern Recognition · Computer Science 2025-06-12 Di Chang , Mingdeng Cao , Yichun Shi , Bo Liu , Shengqu Cai , Shijie Zhou , Weilin Huang , Gordon Wetzstein , Mohammad Soleymani , Peng Wang

This study investigates the use of the unsupervised deep learning framework VoxelMorph for deformable registration of longitudinal abdominopelvic CT images acquired in patients with bone metastases from breast cancer. The CT images were…

Deep learning has significantly advanced automated brain tumor diagnosis, yet clinical adoption remains limited by interpretability and computational constraints. Conventional models often act as opaque ''black boxes'' and fail to quantify…

Computer Vision and Pattern Recognition · Computer Science 2026-02-25 Sepehr Salem Ghahfarokhi , M. Moein Esfahani , Raj Sunderraman , Vince Calhoun , Mohammed Alser

We present a fast learning-based algorithm for deformable, pairwise 3D medical image registration. Current registration methods optimize an objective function independently for each pair of images, which can be time-consuming for large…

Computer Vision and Pattern Recognition · Computer Science 2019-03-14 Guha Balakrishnan , Amy Zhao , Mert R. Sabuncu , John Guttag , Adrian V. Dalca