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The emergence of a body axis is a fundamental step in the development of multicellular organisms. In simple systems such as $\textit{Hydra}$, growing evidence suggests that mechanical forces generated by collective cellular activity play a…

Soft Condensed Matter · Physics 2026-01-09 Arthur Hernandez , Cuncheng Zhu , Luca Giomi

The mechanics of epithelial tissues, which is governed by forces generated in various cell domains, is often investigated using two-dimensional models that account for the apically-positioned actomyosin structures but neglect basolateral…

Soft Condensed Matter · Physics 2024-03-01 Jan Rozman , Matej Krajnc , Primož Ziherl

This paper deals with the problem of point-to-point reachability in multi-linear systems. These systems consist of a partition of the Euclidean space into a finite number of regions and a constant derivative assigned to each region in the…

Logic in Computer Science · Computer Science 2011-06-08 Olga Tveretina , Daniel Funke

Cell polarization underlies many cellular processes, such as differentiation, migration, and budding. Many living cells, such as budding yeast and fission yeast, use cytoskeletal structures to actively transport proteins to one location on…

Biological Physics · Physics 2022-06-22 Harmen Wierenga , Pieter Rein ten Wolde

Edge computing enables data processing and storage closer to where the data are created. Given the largely distributed compute environment and the significantly dispersed data distribution, there are increasing demands of data sharing and…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-06-05 Zheng Li , Diego Seco , José Fuentes-Sepúlveda

This paper presents a highly efficient method to obtain high-resolution, near-optimal 3D topologies optimized for minimum compliance on a standard PC. Using an implicit geometry description we derive a single-scale interpretation of optimal…

Computational Engineering, Finance, and Science · Computer Science 2020-04-22 Jeroen Groen , Florian Stutz , Niels Aage , J. Andreas Bærentzen , Ole Sigmund

Transformers have become the foundational architecture for a broad spectrum of sequence modeling applications, underpinning state-of-the-art systems in natural language processing, vision, and beyond. However, their theoretical limitations…

Computation and Language · Computer Science 2026-02-13 Michelle Yuan , Weiyi Sun , Amir H. Rezaeian , Jyotika Singh , Sandip Ghoshal , Yao-Ting Wang , Miguel Ballesteros , Yassine Benajiba

This work reports an extensive study of three-dimensional topological ordered phases that, in one of the directions behave like usual topological order concerning mobility of excitations, but in the perpendicular plane manifest type-II…

Strongly Correlated Electrons · Physics 2024-12-12 Heitor Casasola , Guilherme Delfino , Yizhi You , Paula F. Bienzobaz , Pedro R. S. Gomes

We study transport across a time-dependent magnetic barrier present on the surface of a three-dimensional topological insulator. We show that such a barrier can be implemented for Dirac electrons on the surface of a three-dimensional…

Mesoscale and Nanoscale Physics · Physics 2020-07-29 Adithi Udupa , K. Sengupta , Diptiman Sen

Cell membranes are studded with protrusions that were thoroughly analyzed with electron microscopy. However, the nanometer-scale three-dimensional motions generated by cell membranes to fit the topography of foreign surfaces and initiate…

Biological Physics · Physics 2008-09-04 Anne Pierres , Anne-Marie Benoliel , Dominique Touchard , Pierre Bongrand

Tissue deformation in ultrasound (US) imaging leads to geometrical errors when measuring tissues due to the pressure exerted by probes. Such deformation has an even larger effect on 3D US volumes as the correct compounding is limited by the…

Image and Video Processing · Electrical Eng. & Systems 2021-10-26 Zhongliang Jiang , Yue Zhou , Yuan Bi , Mingchuan Zhou , Thomas Wendler , Nassir Navab

A fundamental understanding of the network architecture of the brain is necessary for the further development of theories explicating circuit function. Perhaps as a derivative of its initial application to abstract informational systems,…

Neurons and Cognition · Quantitative Biology 2018-07-13 Jennifer Stiso , Danielle Bassett

Many microorganisms swim by performing larger non-reciprocal shape deformations that are initiated locally by molecular motors. However, it remains unclear how decentralized shape control determines the movement of the entire organism.…

Biological Physics · Physics 2025-05-14 Benedikt Hartl , Michael Levin , Andreas Zöttl

Biological systems rely on robust internal information processing: Survival depends on highly reproducible dynamics of regulatory processes. Biological information processing elements, however, are intrinsically noisy (genetic switches,…

Molecular Networks · Quantitative Biology 2009-11-10 Konstantin Klemm , Stefan Bornholdt

Elastic wave manipulation is important in a wide variety of scales in applications including information processing in tiny elastic devices and noise control in big solid structures. The recent emergence of topological materials opens a new…

Materials Science · Physics 2022-10-05 Ying Wu , Jiuyang Lu , Xueqin Huang , Yating Yang , Li Luo , Linyun Yang , Feng Li , Weiyin Deng , Zhengyou Liu

Superconducting wires with broken time-reversal and spin-rotational symmetries can exhibit two distinct topological gapped phases and host bound Majorana states at the phase boundaries. When the wire is tuned to the transition between these…

Mesoscale and Nanoscale Physics · Physics 2022-11-11 Daniil S. Antonenko , Eslam Khalaf , Pavel M. Ostrovsky , Mikhail A. Skvortsov

Soft porous materials, such as biological tissues and soils, are exposed to periodic deformations in a variety of natural and industrial contexts. The detailed flow and mechanics of these deformations have not yet been systematically…

Fluid Dynamics · Physics 2023-06-30 Matilde Fiori , Satyajit Pramanik , Christopher W. MacMinn

2D topological insulators promise novel approaches towards electronic, spintronic, and quantum device applications. This is owing to unique features of their electronic band structure, in which bulk-boundary correspondences enforces the…

Models for confluent biological tissues often describe the network formed by cells as a triple-junction network, similar to foams. However, higher order vertices or multicellular rosettes are prevalent in developmental and {\it in vitro}…

Biological Physics · Physics 2019-02-20 Le Yan , Dapeng Bi

We consider a network of smart sensors for an edge computing application that sample a time-varying signal and send updates to a base station for remote global monitoring. Sensors are equipped with sensing and compute, and can either send…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-02-11 Luca Ballotta , Giovanni Peserico , Francesco Zanini , Paolo Dini