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This paper presents a p-adaptive high-order hybridizable discontinuous Galerkin spectral element method (HDG-SEM) for solving the Poisson equation in electrostatic plasma simulations using particle-in-cell (PIC) schemes. This approach…

Computational Physics · Physics 2026-04-06 Tobias Ott , Stephen Copplestone , Marcel Pfeiffer

This paper presents a large-scale parallel solver, specifically designed to tackle the challenges of solving high-dimensional and high-contrast linear systems in heat transfer topology optimization. The solver incorporates an interpolation…

Numerical Analysis · Mathematics 2025-01-14 Yingjie Zhou , Changqing Ye , Yucheng Liu , Shubin Fu , Eric T. Chung

Poisson denoising is an essential issue for various imaging applications, such as night vision, medical imaging and microscopy. State-of-the-art approaches are clearly dominated by patch-based non-local methods in recent years. In this…

Computer Vision and Pattern Recognition · Computer Science 2016-09-20 Wensen Feng , Hong Qiao , Yunjin Chen

In this paper, we propose and analyze a high-order finite volume method for the Poisson problem based on the reduced discontinuous Galerkin (RDG) space. The main idea is to employ the RDG space as the trial space and the piecewise constant…

Numerical Analysis · Mathematics 2025-12-11 Wenbo Hu , Yinhua Xia

Spectral clustering is one of the most popular graph clustering algorithms, which achieves the best performance for many scientific and engineering applications. However, existing implementations in commonly used software platforms such as…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-02-14 Yu Jin , Joseph F. JaJa

In this work, we benchmark and discuss the performance of the scalable methods for the Poisson problem which are used widely in practice: the fast Fourier transform (FFT), the fast multipole method (FMM), the geometric multigrid (GMG), and…

Numerical Analysis · Mathematics 2016-07-12 Amir Gholami , Dhairya Malhotra , Hari Sundar , George Biros

The Poisson-Boltzmann (PB) model governs the electrostatics of solvated biomolecules, i.e., potential, field, energy, and force. These quantities can provide useful information about protein properties, functions, and dynamics. By…

Biomolecules · Quantitative Biology 2023-12-29 Xin Yang , Elyssa Sliheet , Reece Iriye , Daniel Reynolds , Weihua Geng

We have developed an adaptive multigrid code for solving the Poisson equation in gravitational simulations. Finer rectangular subgrids are adaptively created in locations where the density exceeds a local level-dependent threshold. We…

Astrophysics · Physics 2015-06-24 I. Suisalu , E. Saar

Relying on the classical connection between Backward Stochastic Differential Equations (BSDEs) and non-linear parabolic partial differential equations (PDEs), we propose a new probabilistic learning scheme for solving high-dimensional…

Numerical Analysis · Mathematics 2021-02-25 Jean-François Chassagneux , Junchao Chen , Noufel Frikha , Chao Zhou

We have developed a gravity solver based on combining the well developed Particle-Mesh (PM) method and TREE methods. It is designed for and has been implemented on parallel computer architectures. The new code can deal with tens of millions…

Astrophysics · Physics 2009-10-22 Guohong Xu

We propose a high-performance GPU solver for inverse homogenization problems to design high-resolution 3D microstructures. Central to our solver is a favorable combination of data structures and algorithms, making full use of the parallel…

Optimization and Control · Mathematics 2023-05-26 Di Zhang , Xiaoya Zhai , Ligang Liu , Xiao-Ming Fu

The local relaxation algorithm is promising for fast solution of Poisson's equations, which computes the electric field distribution in a stepwise manner via local curl-free updates while strictly enforcing Gauss's law. We propose a novel…

Numerical Analysis · Mathematics 2026-03-04 Zhenli Xu , Qian Yin , Hongyu Zhou

The Gyrokinetic Toroidal Code at Princeton (GTC-P) is a highly scalable and portable particle-in-cell (PIC) code. It solves the 5D Vlasov-Poisson equation featuring efficient utilization of modern parallel computer architectures at the…

Distributed, Parallel, and Cluster Computing · Computer Science 2015-10-20 Bei Wang , Stephane Ethier , William Tang , Khaled Ibrahim , Kamesh Madduri , Samuel Williams , Leonid Oliker

Given a graph, finding the distance-2 maximal independent set (MIS-2) of the vertices is a problem that is useful in several contexts such as algebraic multigrid coarsening or multilevel graph partitioning. Such multilevel methods rely on…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-04-07 Brian Kelley , Sivasankaran Rajamanickam

In this paper, we propose an efficient and accurate message-passing interface (MPI)-based parallel simulator for streamer discharges in three dimensions using the fluid model. First, we propose a new second-order semi-implicit scheme for…

Computational Physics · Physics 2021-12-13 Bo Lin , Chijie Zhuang , Zhenning Cai , Rong Zeng , Weizhu Bao

We propose an Extended Hybrid High-Order scheme for the Poisson problem with solution possessing weak singularities. Some general assumptions are stated on the nature of this singularity and the remaining part of the solution. The method is…

Numerical Analysis · Mathematics 2022-05-16 Liam Yemm

Solving differential equations is one of the most compelling applications of quantum computing. Most existing quantum algorithms addressing general ordinary and partial differential equations are thought to be too expensive to execute…

Quantum Physics · Physics 2023-05-26 Shengbin Wang , Zhimin Wang , Wendong Li , Lixin Fan , Guolong Cui , Zhiqiang Wei , Yongjian Gu

Self-consistent multi-particle simulation plays an important role in studying beam-beam effects and space charge effects in high-intensity beams. The Poisson equation has to be solved at each time-step based on the particle density…

Accelerator Physics · Physics 2014-10-15 J. Qiang , S. Paret

In this paper, we report the advantages of using a stochastic algorithm in the context of mineral exploration based on gravity measurements. This approach has the advantage over deterministic methods in that it allows one to find the…

Numerical Analysis · Mathematics 2017-09-25 Fabrizio Donzelli , Alexander Bihlo , Mauricio Kischinhevsky , Colin G. Farquharson

In this paper, we present a GPU-accelerated direct-sum boundary integral method to solve the linear Poisson-Boltzmann (PB) equation. In our method, a well-posed boundary integral formulation is used to ensure the fast convergence of Krylov…

Numerical Analysis · Mathematics 2015-06-12 Weihua Geng , Ferosh Jacob