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This contribution features an accelerated computation of the Sinkhorn's algorithm, which approximates the Wasserstein transportation distance, by employing nonequispaced fast Fourier transforms (NFFT). The algorithm proposed allows…

Optimization and Control · Mathematics 2023-03-07 Rajmadan Lakshmanan , Alois Pichler , Daniel Potts

The (unweighted) tree edit distance problem for $n$ node trees asks to compute a measure of dissimilarity between two rooted trees with node labels. The current best algorithm from more than a decade ago runs in $O(n ^ 3)$ time [Demaine,…

Data Structures and Algorithms · Computer Science 2021-11-12 Xiao Mao

We study the complexity of geometric problems on spaces of low fractal dimension. It was recently shown by [Sidiropoulos & Sridhar, SoCG 2017] that several problems admit improved solutions when the input is a pointset in Euclidean space…

Computational Complexity · Computer Science 2017-12-14 Anastasios Sidiropoulos , Kritika Singhal , Vijay Sridhar

We analyze two algorithms for approximating the general optimal transport (OT) distance between two discrete distributions of size $n$, up to accuracy $\varepsilon$. For the first algorithm, which is based on the celebrated Sinkhorn's…

Data Structures and Algorithms · Computer Science 2018-06-08 Pavel Dvurechensky , Alexander Gasnikov , Alexey Kroshnin

Computing bounded depth decompositions is a bottleneck in many applications of the treedepth parameter. The fastest known algorithm, which is due to Reidl, Rossmanith, S\'{a}nchez Villaamil, and Sikdar [ICALP 2014], runs in…

Data Structures and Algorithms · Computer Science 2025-02-25 Lars Jaffke , Paloma T. de Lima , Wojciech Nadara , Emmanuel Sam

In the field of topological data analysis, persistence modules are used to express geometrical features of data sets. The matching distance $d_\mathcal{M}$ measures the difference between $2$-parameter persistence modules by taking the…

Algebraic Topology · Mathematics 2023-12-08 Håvard Bakke Bjerkevik , Michael Kerber

This paper extends the problem of 2-dimensional palindrome search into the area of approximate matching. Using the Hamming distance as the measure, we search for 2D palindromes that allow up to $k$ mismatches. We consider two different…

Data Structures and Algorithms · Computer Science 2020-02-27 Dina Sokol

Fr\'echet regression generalizes linear regression to metric-space-valued responses by defining fitted values as minimizers of weighted Fr\'echet functionals. Since these weights may have mixed signs, the resulting objective is a signed…

Optimization and Control · Mathematics 2026-05-25 Yamin Zhou , César A. Uribe

We in this paper consider Fr\'echet sufficient dimension reduction with responses being complex random objects in a metric space and high dimension Euclidean predictors. We propose a novel approach called weighted inverse regression…

Statistics Theory · Mathematics 2020-07-02 Chao Ying , Zhou Yu

In this paper, we give a detailed account of the algorithm outlined in [1] for Feynman integral reduction and $\varepsilon$-factorised differential equations. The algorithm consists of two steps. In the first step, we use a new geometric…

We revisit the problem of permuting an array of length $n$ according to a given permutation in place, that is, using only a small number of bits of extra storage. Fich, Munro and Poblete [FOCS 1990, SICOMP 1995] obtained an elegant…

Data Structures and Algorithms · Computer Science 2021-01-12 Bartłomiej Dudek , Paweł Gawrychowski , Karol Pokorski

Can Grover's algorithm speed up search of a physical region - for example a 2-D grid of size sqrt(n) by sqrt(n)? The problem is that sqrt(n) time seems to be needed for each query, just to move amplitude across the grid. Here we show that…

Quantum Physics · Physics 2007-05-23 Scott Aaronson , Andris Ambainis

We provide theoretical analyses for two algorithms that solve the regularized optimal transport (OT) problem between two discrete probability measures with at most $n$ atoms. We show that a greedy variant of the classical Sinkhorn…

Data Structures and Algorithms · Computer Science 2021-07-27 Tianyi Lin , Nhat Ho , Michael I. Jordan

In quantum information, trace distance is a basic metric of distinguishability between quantum states. However, there is no known efficient approach to estimate the value of trace distance in general. In this paper, we propose efficient…

Quantum Physics · Physics 2024-03-25 Qisheng Wang , Zhicheng Zhang

In algorithms for finite metric spaces, it is common to assume that the distance between two points can be computed in constant time, and complexity bounds are expressed only in terms of the number of points of the metric space. We…

Computational Geometry · Computer Science 2019-01-28 Michael Kerber , Arnur Nigmetov

Let $P$ be a polygonal curve in $\mathbb{R}^D$ of length $n$, and $S$ be a point set of size $k$. The Curve/Point Set Matching problem consists of finding a polygonal curve $Q$ on $S$ such that its Fr\'echet distance from $P$ is less than a…

Computational Geometry · Computer Science 2014-05-06 Paul Accisano , Alper Üngör

This paper introduces the Furthest Hyperplane Problem (FHP), which is an unsupervised counterpart of Support Vector Machines. Given a set of n points in Rd, the objective is to produce the hyperplane (passing through the origin) which…

Computational Complexity · Computer Science 2012-02-06 Zohar Karnin , Edo Liberty , Shachar Lovett , Roy Schwartz , Omri Weinstein

This work establishes a framework for solving inverse boundary problems with the geodesic based quadratic Wasserstein distance ($W_{2}$). A general form of the Fr\'echet gradient is systematically derived by optimal transportation (OT)…

Numerical Analysis · Mathematics 2022-10-31 Gang Bao , Yixuan Zhang

Distance covariance and distance correlation have been widely adopted in measuring dependence of a pair of random variables or random vectors. If the computation of distance covariance and distance correlation is implemented directly…

Computation · Statistics 2014-10-07 Xiaoming Huo , Gabor J. Szekely

We revisit a fundamental problem in string matching: given a pattern of length m and a text of length n, both over an alphabet of size $\sigma$, compute the Hamming distance between the pattern and the text at every location. Several…

Data Structures and Algorithms · Computer Science 2020-01-03 Timothy M. Chan , Shay Golan , Tomasz Kociumaka , Tsvi Kopelowitz , Ely Porat
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