Related papers: Hipster Tree Growth Rates
Networks having the geometry and the connectivity of trees are considered as the spatial support of spatiotemporal dynamical processes. A tree is characterized by two parameters: its ramification and its depth. The local dynamics at the…
A spanning tree without a vertex of degree two is called a Hist which is an abbreviation for homeomorphically irreducible spanning tree. We provide a necessary condition for the existence of a Hist in a cubic graph. As one consequence, we…
For a connected graph $G$, a spanning tree $T$ of $G$ is called a homeomorphically irreducible spanning tree (HIST) if $T$ has no vertices of degree 2. Albertson {\em et al.} proved that it is $NP$-complete to decide whether a graph…
We identify the complexity of the classification problem for automorphisms of a given countable regularly branching tree up to conjugacy. We consider both the rooted and unrooted cases. Additionally, we calculate the complexity of the…
We define a bivariate polynomial for unlabeled rooted trees and show that the polynomial of an unlabeled rooted tree $T$ is the generating function of a class of subtrees of $T$. We prove that the polynomial is a complete isomorphism…
Working with generating functions, the combinatorics of a recurrence relation can be expressed in a way that allows for more efficient calculation of the quantity. This is true of the Catalan numbers for an ordered binary tree…
The Subtree Isomorphism problem asks whether a given tree is contained in another given tree. The problem is of fundamental importance and has been studied since the 1960s. For some variants, e.g., ordered trees, near-linear time algorithms…
An evolutionary tree (phylogenetic tree) is a binary, rooted, unordered tree that models the evolutionary history of currently living species in which leaves are labeled by species. In this paper, we investigate the problem of finding the…
A compacted binary tree is a graph created from a binary tree such that repeatedly occurring subtrees in the original tree are represented by pointers to existing ones, and hence every subtree is unique. Such representations form a special…
We prove cyclic sieving phenomena satisfied by corner-rooted plane trees (alias ordered trees). The sets of rooted plane trees that we consider are: (1) all trees with $n$ nodes; (2) all trees with $n$ nodes and $k$ leaves; (3) all trees…
Tree-based networks are a class of phylogenetic networks that attempt to formally capture what is meant by "tree-like" evolution. A given non-tree-based phylogenetic network, however, might appear to be very close to being tree-based, or…
We characterize those countable rooted trees whose full automorphism group has uncountable strong cofinality or contains an open subgroup with ample generics.
Rooted phylogenetic networks allow biologists to represent evolutionary relationships between present-day species by revealing ancestral speciation and hybridization events. A convenient and well-studied class of such networks are…
We consider the counting problem of the number of \textit{leaf-labeled increasing trees}, where internal nodes may have an arbitrary number of descendants. The set of all such trees is a discrete representation of the genealogies obtained…
This paper extends the study of fringe trees in random plane trees with a given degree statistic. While previous work established the asymptotic normality of the count of fringe trees isomorphic to a fixed tree, we investigate the case…
A split-by-edges tree of a graph G on n vertices is a binary tree T where the root = V(G), every leaf is an independent set in G, and for every other node N in T with children L and R there is a pair of vertices {u, v} in N such that L = N…
A leaf of a plane tree is called an old leaf if it is the leftmost child of its parent, and it is called a young leaf otherwise. In this paper we enumerate plane trees with a given number of old leaves and young leaves. The formula is…
Consider a rooted tree $T$ with leaf-set $[n]$, and with all non-leaf vertices having out-degree $2$, at least. A rooted tree $\mathcal T$ with leaf-set $S\subset [n]$ is induced by $S$ in $T$ if $\mathcal T$ is the lowest common ancestor…
It is shown that a group defined by forbidding all patterns of size s+1 that do not appear in a given self-similar group of tree automorphisms is the topological closure of a self-similar, countable, regular branch group, branching over its…
A pebble tree is an ordered tree where each node receives some colored pebbles, in such a way that each unary node receives at least one pebble, and each subtree has either one more or as many leaves as pebbles of each color. We show that…