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Understanding the emergent behavior of chemical reaction networks (CRNs) is a fundamental aspect of biology and its origin from inanimate matter. A closed CRN monotonically tends to thermal equilibrium, but when it is opened to external…

Molecular Networks · Quantitative Biology 2024-05-16 Masanari Shimada , Pegah Behrad , Eric De Giuli

A new method is introduced allowing to solve exactly the reactions A+A->inert and A+A->A on the 1D lattice with synchronous diffusional dynamics (simultaneous hopping of all particles). Exact connections are found relating densities and…

Condensed Matter · Physics 2010-10-12 Vladimir Privman

An autocatalytic reacting system with particles interacting at a finite distance is studied. We investigate the effects of the discrete-particle character of the model on properties like reaction rate, quenching phenomenon and front…

Statistical Mechanics · Physics 2009-11-13 Stefano Berti , Cristobal Lopez , Davide Vergni , Angelo Vulpiani

We propose a model for diffusion-limited annihilation of two species, $A+B\to A$ or $B$, where the motion of the particles is subject to a drift. For equal initial concentrations of the two species, the density follows a power-law decay for…

Condensed Matter · Physics 2010-10-12 Daniel ben-Avraham , Vladimir Privman , Dexin Zhong

We introduce a simple nonequilibrium model for a driven diffusive system with nonconservative reaction kinetics which exhibits ergodicity breaking and hysteresis in one dimension. These phenomena can be understood through a description of…

Statistical Mechanics · Physics 2009-11-10 A. Rakos , M. Paessens , G. M. Schuetz

Reaction dynamics involving subdiffusive species is an interesting topic with only few known results, especially when the motion of different species is characterized by different anomalous diffusion exponents. Here we study the reaction…

Soft Condensed Matter · Physics 2009-11-11 S. B. Yuste , Katja Lindenberg

We establish a weak-strong uniqueness principle for solutions to entropy-dissipating reaction-diffusion equations: As long as a strong solution to the reaction-diffusion equation exists, any weak solution and even any renormalized solution…

Analysis of PDEs · Mathematics 2017-03-03 Julian Fischer

We consider the coagulation dynamics A+A -> A and A+A <-> A and the annihilation dynamics A+A -> 0 for particles moving subdiffusively in one dimension. This scenario combines the "anomalous kinetics" and "anomalous diffusion" problems,…

Statistical Mechanics · Physics 2009-11-07 S. B. Yuste , Katja Lindenberg

We study the dynamics of condensation of the inclusion process on a one-dimensional periodic lattice in the thermodynamic limit, generalising recent results on finite lattices for symmetric dynamics. Our main focus is on totally asymmetric…

Statistical Mechanics · Physics 2015-06-30 Jiarui Cao , Paul Chleboun , Stefan Grosskinsky

The totally asymmetric simple exclusion process in discrete time is considered on finite rings with fixed number of particles. A translation-invariant version of the backward-ordered sequential update is defined for periodic boundary…

Soft Condensed Matter · Physics 2007-05-23 J. G. Brankov , Vl. V. Papoyan , V. S. Poghosyan , V. B. Priezzhev

The global existence of bounded weak solutions to a diffusion system modeling biofilm growth is proven. The equations consist of a reaction-diffusion equation for the substrate concentration and a fourth-order Cahn-Hilliard-type equation…

Analysis of PDEs · Mathematics 2023-07-20 Christoph Helmer , Ansgar Jüngel

This paper establishes a rigorous mathematical framework for the Multi-Scale Negative Coupled System (MNCS), a dynamical model describing hierarchical state spaces with directed, sign-structured interactions. We address the stabilization of…

Analysis of PDEs · Mathematics 2026-01-05 Pengyue Hou

We study three basic diffusion-controlled reaction processes -- annihilation, coalescence, and aggregation. We examine the evolution starting with the most natural inhomogeneous initial configuration where a half-line is uniformly filled by…

Statistical Mechanics · Physics 2015-05-13 P. L. Krapivsky , E. Ben-Naim

We consider a one-dimensional model consisting of an assembly of two-velocity particles moving freely between collisions. When two particles meet, they instantaneously annihilate each other and disappear from the system. Moreover each…

Statistical Mechanics · Physics 2009-10-31 Pierre-Antoine Rey , Michel Droz , Jaroslaw Piasecki

We use a boolean cellular automaton model to describe the diffusion limited dynamics of the irreversible reaction A+A->A+S on a 1D lattice. We derive a set of equations for the dynamics of the empty interval probabilities from which…

Statistical Mechanics · Physics 2007-05-23 E. Abad , H. L. Frisch , G. Nicolis

Basic theoretical issues relating to the response of confined relativistic particles are considered including the scaling of the response in spacelike and timelike regions of momentum transfer and the role of final state interactions. A…

Nuclear Theory · Physics 2009-11-07 Mark W. Paris

We expand on a previous study of fronts in finite particle number reaction-diffusion systems in the presence of a reaction rate gradient in the direction of the front motion. We study the system via reaction-diffusion equations, using the…

Statistical Mechanics · Physics 2009-11-11 Elisheva Cohen , David A. Kessler , Herbert Levine

We study a class of stochastic ballistic annihilation and coalescence models with a binary velocity distribution in one dimension. We obtain an exact solution for the density which reveals a universal phase diagram for the asymptotic…

Statistical Mechanics · Physics 2009-10-31 R. A. Blythe , M. R. Evans , Y. Kafri

We consider a reaction-diffusion process with retardation. The particles, immersed in traps initially, remain inactive until another particle is annihilated spontaneously with a rate $\lambda$ at a certain point $\vec x$. In that case the…

Statistical Mechanics · Physics 2015-06-25 Michael Schulz , Steffen Trimper , Knud Zabrocki

We demonstrate the accuracy of the hypernetted chain closure and of the mean-field approximation for the calculation of the fluid-state properties of systems interacting by means of bounded and positive-definite pair potentials with…

Soft Condensed Matter · Physics 2009-11-13 Christos N. Likos , Bianca M. Mladek , Dieter Gottwald , Gerhard Kahl
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