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Inspired by the success of large language models (LLMs), there is a significant research shift from traditional graph learning methods to LLM-based graph frameworks, formally known as GraphLLMs. GraphLLMs leverage the reasoning power of…

Machine Learning · Computer Science 2025-06-16 Qihai Zhang , Xinyue Sheng , Yuanfu Sun , Qiaoyu Tan

Software vulnerabilities remain a persistent risk, yet static and dynamic analyses often overlook structural dependencies that shape insecure behaviors. Viewing programs as heterogeneous graphs, we capture control- and data-flow relations…

Software Engineering · Computer Science 2025-10-14 Jugal Gajjar , Kaustik Ranaware , Kamalasankari Subramaniakuppusamy

Our interest is in scientific problems with the following characteristics: (1) Data are naturally represented as graphs; (2) The amount of data available is typically small; and (3) There is significant domain-knowledge, usually expressed…

Machine Learning · Computer Science 2021-08-17 Tirtharaj Dash , Ashwin Srinivasan , Lovekesh Vig

Can we combine heterogenous graph structure with text to learn high-quality semantic and behavioural representations? Graph neural networks (GNN)s encode numerical node attributes and graph structure to achieve impressive performance in a…

Machine Learning · Computer Science 2022-06-23 Vassilis N. Ioannidis , Xiang Song , Da Zheng , Houyu Zhang , Jun Ma , Yi Xu , Belinda Zeng , Trishul Chilimbi , George Karypis

Multi-view multi-label feature selection aims to identify informative features from heterogeneous views, where each sample is associated with multiple interdependent labels. This problem is particularly important in machine learning…

Artificial Intelligence · Computer Science 2025-11-20 Zhiqi Chen , Yuzhou Liu , Jiarui Liu , Wanfu Gao

Recent years have seen the vast potential of Graph Neural Networks (GNN) in many fields where data is structured as graphs (e.g., chemistry, recommender systems). In particular, GNNs are becoming increasingly popular in the field of…

Graph Neural Networks (GNNs) have shown success in learning from graph structured data containing node/edge feature information, with application to social networks, recommendation, fraud detection and knowledge graph reasoning. In this…

Machine Learning · Computer Science 2021-11-24 Xiang Song , Runjie Ma , Jiahang Li , Muhan Zhang , David Paul Wipf

Vulnerability identification is crucial to protect the software systems from attacks for cyber security. It is especially important to localize the vulnerable functions among the source code to facilitate the fix. However, it is a…

Software Engineering · Computer Science 2019-09-10 Yaqin Zhou , Shangqing Liu , Jingkai Siow , Xiaoning Du , Yang Liu

Graph Neural Networks (GNNs) have been widely employed for feature representation learning in molecular graphs. Therefore, it is crucial to enhance the expressiveness of feature representation to ensure the effectiveness of GNNs. However, a…

Machine Learning · Computer Science 2024-09-16 Chengyu Yao , Hong Huang , Hang Gao , Fengge Wu , Haiming Chen , Junsuo Zhao

Graph Neural Networks (GNNs) are the currently most effective methods for predicting molecular properties but there remains a need for more accurate models. GNN accuracy can be improved by increasing the model complexity but this also…

Machine Learning · Computer Science 2025-10-24 Teng Jiek See , Daokun Zhang , Mario Boley , David K. Chalmers

Graph Neural Networks (GNNs) are an emerging research field. This specialized Deep Neural Network (DNN) architecture is capable of processing graph structured data and bridges the gap between graph processing and Deep Learning (DL). As…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-05-24 Jana Vatter , Ruben Mayer , Hans-Arno Jacobsen

Recent advances in Vision-Language Models (VLMs) have shown promising capabilities in interpreting visualized graph data, offering a new perspective for graph-structured reasoning beyond traditional Graph Neural Networks (GNNs). However,…

Artificial Intelligence · Computer Science 2026-04-27 Qihang Ai , Ruizhou Li , Menghui Wang , Haiyun Jiang

The emergence of large-scale pre-trained language models has revolutionized various AI research domains. Transformers-based Large Language Models (LLMs) have gradually replaced CNNs and RNNs to unify fields of computer vision and natural…

Computation and Language · Computer Science 2024-02-07 Ruosong Ye , Caiqi Zhang , Runhui Wang , Shuyuan Xu , Yongfeng Zhang

Developments in Graph-Language Models (GLMs) aim to integrate the structural reasoning capabilities of Graph Neural Networks (GNNs) with the semantic understanding of Large Language Models (LLMs). However, we demonstrate that current…

Computation and Language · Computer Science 2025-08-29 Soham Petkar , Hari Aakash K , Anirudh Vempati , Akshit Sinha , Ponnurangam Kumarauguru , Chirag Agarwal

Explicit structural information has been proven to be encoded by Graph Neural Networks (GNNs), serving as auxiliary knowledge to enhance model capabilities and improve performance in downstream NLP tasks. However, recent studies indicate…

Computation and Language · Computer Science 2025-06-30 Li Zhou , Hao Jiang , Junjie Li , Zefeng Zhao , Feng Jiang , Wenyu Chen , Haizhou Li

Code search aims to retrieve accurate code snippets based on a natural language query to improve software productivity and quality. With the massive amount of available programs such as (on GitHub or Stack Overflow), identifying and…

Software Engineering · Computer Science 2023-02-14 Shangqing Liu , Xiaofei Xie , Jingkai Siow , Lei Ma , Guozhu Meng , Yang Liu

Graph neural networks (GNNs) have attracted tremendous attention from the graph learning community in recent years. It has been widely adopted in various real-world applications from diverse domains, such as social networks and biological…

Code vulnerability detection (CVD) is essential for addressing and preventing system security issues, playing a crucial role in ensuring software security. Previous learning-based vulnerability detection methods rely on either fine-tuning…

Computation and Language · Computer Science 2025-01-07 Xuefeng Jiang , Lvhua Wu , Sheng Sun , Jia Li , Jingjing Xue , Yuwei Wang , Tingting Wu , Min Liu

Graph neural networks (GNNs) have been widely used to learn vector representation of graph-structured data and achieved better task performance than conventional methods. The foundation of GNNs is the message passing procedure, which…

Machine Learning · Computer Science 2022-01-31 Takeshi D. Itoh , Takatomi Kubo , Kazushi Ikeda

The rapid advancement of pre-trained language models (PLMs) has demonstrated promising results for various code-related tasks. However, their effectiveness in detecting real-world vulnerabilities remains a critical challenge. While existing…

Cryptography and Security · Computer Science 2025-11-25 Youpeng Li , Weiliang Qi , Xuyu Wang , Fuxun Yu , Xinda Wang