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Code understanding models increasingly rely on pretrained language models (PLMs) and graph neural networks (GNNs), which capture complementary semantic and structural information. We conduct a controlled empirical study of PLM-GNN hybrids…

Software Engineering · Computer Science 2026-04-29 Mohamed Taoufik Kaouthar El Idrissi , Edward Zulkoski , Mohammad Hamdaqa

Large Language Models (LLMs) have emerged as a popular choice in vulnerability detection studies given their foundational capabilities, open source availability, and variety of models, but have limited scalability due to extensive compute…

Software Engineering · Computer Science 2026-04-01 Miles Farmer , Ekincan Ufuktepe , Anne Watson , Hialo Muniz Carvalho , Vadim Okun , Zineb Maasaoui , Kannappan Palaniappan

Recent progress in Graph Neural Networks (GNNs) has greatly enhanced the ability to model complex molecular structures for predicting properties. Nevertheless, molecular data encompasses more than just graph structures, including textual…

Machine Learning · Computer Science 2024-06-04 Junjie Xu , Zongyu Wu , Minhua Lin , Xiang Zhang , Suhang Wang

Recent research on integrating Large Language Models (LLMs) with Graph Neural Networks (GNNs) typically follows two approaches: LLM-centered models, which convert graph data into tokens for LLM processing, and GNN-centered models, which use…

Machine Learning · Computer Science 2024-12-11 Haotong Yang , Xiyuan Wang , Qian Tao , Shuxian Hu , Zhouchen Lin , Muhan Zhang

Identifying vulnerable code is a precautionary measure to counter software security breaches. Tedious expert effort has been spent to build static analyzers, yet insecure patterns are barely fully enumerated. This work explores a deep…

Artificial Intelligence · Computer Science 2021-09-09 Yufan Zhuang , Sahil Suneja , Veronika Thost , Giacomo Domeniconi , Alessandro Morari , Jim Laredo

While Language Models (LMs) are the workhorses of NLP, their interplay with structured knowledge graphs (KGs) is still actively researched. Current methods for encoding such graphs typically either (i) linearize them for embedding with LMs…

Computation and Language · Computer Science 2024-06-04 Moritz Plenz , Anette Frank

Identifying vulnerabilities in the source code is essential to protect the software systems from cyber security attacks. It, however, is also a challenging step that requires specialized expertise in security and code representation. To…

Machine Learning · Computer Science 2022-02-08 Van-Anh Nguyen , Dai Quoc Nguyen , Van Nguyen , Trung Le , Quan Hung Tran , Dinh Phung

Code Pre-trained Models (CodePTMs) based vulnerability detection have achieved promising results over recent years. However, these models struggle to generalize as they typically learn superficial mapping from source code to labels instead…

Cryptography and Security · Computer Science 2024-06-07 Xiaohu Du , Ming Wen , Jiahao Zhu , Zifan Xie , Bin Ji , Huijun Liu , Xuanhua Shi , Hai Jin

Graph Neural Networks (GNNs), specifically designed to process the graph data, have achieved remarkable success in various applications. Link stealing attacks on graph data pose a significant privacy threat, as attackers aim to extract…

Cryptography and Security · Computer Science 2024-12-10 Faqian Guan , Tianqing Zhu , Wenhan Chang , Wei Ren , Wanlei Zhou

Software vulnerabilities continue to pose significant threats to modern information systems, requiring a timely and accurate risk assessment. Public repositories, such as the National Vulnerability Database and CVE details, are regularly…

Cryptography and Security · Computer Science 2026-04-09 Luat Do , Jiao Yin , Jinli Cao , Hua Wang

This study explores the effectiveness of graph neural networks (GNNs) for vulnerability detection in software code, utilizing a real-world dataset of Java vulnerability-fixing commits. The dataset's structure, based on the number of…

Cryptography and Security · Computer Science 2024-06-19 Ravil Mussabayev

Graph data contains rich node features and unique edge information, which have been applied across various domains, such as citation networks or recommendation systems. Graph Neural Networks (GNNs) are specialized for handling such data and…

Machine Learning · Computer Science 2024-06-26 Faqian Guan , Tianqing Zhu , Hui Sun , Wanlei Zhou , Philip S. Yu

Recently published graph neural networks (GNNs) show promising performance at social event detection tasks. However, most studies are oriented toward monolingual data in languages with abundant training samples. This has left the more…

Machine Learning · Computer Science 2023-04-03 Jiaqian Ren , Hao Peng , Lei Jiang , Jia Wu , Yongxin Tong , Lihong Wang , Xu Bai , Bo Wang , Qiang Yang

Large Language Models (LLMs) have advanced Graph Neural Networks (GNNs) by enriching node representations with semantic features, giving rise to LLM-enhanced GNNs that achieve notable performance gains. However, the robustness of these…

Machine Learning · Computer Science 2026-03-30 Yuhang Ma , Jie Wang , Zheng Yan

Pre-trained Language Models (PLMs) have the potential to transform software development tasks. However, despite significant advances, current PLMs struggle to capture the structured and relational attributes of code, such as control flow…

Software Engineering · Computer Science 2026-05-06 Mert Tiftikci , Amir Molzam Sharifloo , Mira Mezini

Graph kernels are historically the most widely-used technique for graph classification tasks. However, these methods suffer from limited performance because of the hand-crafted combinatorial features of graphs. In recent years, graph neural…

Machine Learning · Computer Science 2022-02-28 Aosong Feng , Chenyu You , Shiqiang Wang , Leandros Tassiulas

Graph mining is an important area in data mining and machine learning that involves extracting valuable information from graph-structured data. In recent years, significant progress has been made in this field through the development of…

Machine Learning · Computer Science 2024-12-30 Yuxin You , Zhen Liu , Xiangchao Wen , Yongtao Zhang , Wei Ai

How can we learn effective node representations on textual graphs? Graph Neural Networks (GNNs) that use Language Models (LMs) to encode textual information of graphs achieve state-of-the-art performance in many node classification tasks.…

Deep reinforcement learning (DRL) has been widely used in many important tasks of communication networks. In order to improve the perception ability of DRL on the network, some studies have combined graph neural networks (GNNs) with DRL,…

Cryptography and Security · Computer Science 2025-01-22 Xuzeng Li , Tao Zhang , Jian Wang , Zhen Han , Jiqiang Liu , Jiawen Kang , Dusit Niyato , Abbas Jamalipour

Large Language Models (LLMs) have significantly advanced code analysis tasks, yet they struggle to detect malicious behaviors fragmented across files, whose intricate dependencies easily get lost in the vast amount of benign code. We…

Software Engineering · Computer Science 2026-01-23 Hang Gao , Tao Peng , Baoquan Cui , Hong Huang , Fengge Wu , Junsuo Zhao , Jian Zhang
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