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Cellular automata (CA) is an important modelling paradigm for complex systems. In the design of cellular automata, the most difficult task is to find the transformation rules that describe the temporal evolution or pattern of a modelled…

Cellular Automata and Lattice Gases · Physics 2023-10-03 Lei Kou , Fangfang Zhang , Luobing Chen , Wende Ke , Quande Yuan , Junhe Wan , Zhen Wang

Modeling the immune system so that its essential functionalities stand out without the need for every molecular or cellular interaction to be taken into account has been challenging for many decades. Two competing approaches have been the…

Cellular Automata and Lattice Gases · Physics 2017-11-13 Kátia K. Cassiano , Valmir C. Barbosa

Understanding how microenvironmental heterogeneity influences tumor progression is essential for advancing both cancer biology and therapeutic strategies. In this study, we develop a cellular automata (CA) model to simulate tumor growth…

Cell Behavior · Quantitative Biology 2026-01-26 Yue Deng , Mingjing Li , Jinzhi Lei

Search for extraterrestrial life and intelligence constitutes one of the major endeavors in science, but has yet been quantitatively modeled only rarely and in a cursory and superficial fashion. We argue that probabilistic cellular automata…

Instrumentation and Methods for Astrophysics · Physics 2012-09-14 B. Vukotić , M. M. Ćirković

Cyclic cellular automata (CCA) are models of excitable media. Started from random initial conditions, they produce several different kinds of spatial structure, depending on their control parameters. We introduce new tools from information…

Adaptation and Self-Organizing Systems · Physics 2007-05-23 Cosma Rohilla Shalizi , Kristina Lisa Shalizi

Among the different computational approaches modelling the dynamics of isogenic cell populations, discrete stochastic models can describe with sufficient accuracy the evolution of small size populations. However, for a systematic and…

Molecular Networks · Quantitative Biology 2013-12-16 I Aviziotis , M Kavousanakis , I Bitsanis , A Boudouvis

A small-world cellular automaton network has been formulated to simulate the long-range interactions of complex networks using unconventional computing methods in this paper. Conventional cellular automata use local updating rules. The new…

Cellular Automata and Lattice Gases · Physics 2010-03-26 Xin-She Yang , Young Z. L. Yang

Traditional principal component analysis (PCA) is well known in high-dimensional data analysis, but it requires to express data by a matrix with observations to be continuous. To overcome the limitations, a new method called flexible PCA…

Methodology · Statistics 2021-08-17 Tonglin Zhang , Baijian Yang , Qianqian Song , Jing Su

In a probabilistic cellular automaton in which all local transitions have positive probability, the problem of keeping a bit of information indefinitely is nontrivial, even in an infinite automaton. Still, there is a solution in 2…

Probability · Mathematics 2024-01-26 Peter Gacs

We consider the problem of metastability in a probabilistic cellular automaton (PCA) with a parallel updating rule which is reversible with respect to a Gibbs measure. The dynamical rules contain two parameters $\beta$ and $h$ which…

Statistical Mechanics · Physics 2009-10-31 Stephen Bigelis , Emilio N. M. Cirillo , Joel L. Lebowitz , Eugene R. Speer

In this paper I describe a cellular automaton model of a multi-species ecosystem, suitable for the study of emergent properties of macroevolution. Unlike majority of ecological models, the number of coexisting species is not fixed. Starting…

Populations and Evolution · Quantitative Biology 2009-09-23 Wojciech Borkowski

Stavskaya's model is a one-dimensional probabilistic cellular automaton (PCA) introduced in the end of the 1960's as an example of a model displaying a nonequilibrium phase transition. Although its absorbing state phase transition is well…

Statistical Mechanics · Physics 2011-01-25 J. Ricardo G. Mendonça

Quantum computation based on quantum cellular automata (QCA) can greatly reduce the control and precision necessary for experimental implementations of quantum information processing. A QCA system consists of a few species of qubits in…

Quantum Physics · Physics 2009-11-10 Yaakov S. Weinstein , C. Stephen Hellberg

We propose and investigate a one-parameter probabilistic mixture of one-dimensional elementary cellular automata under the guise of a model for the dynamics of a single-species unstructured population with nonoverlapping generations in…

Statistical Mechanics · Physics 2018-03-09 J. Ricardo G. Mendonça

We demonstrate that the concept of a conservation law can be naturally extended from deterministic to probabilistic cellular automata (PCA) rules. The local function for conservative PCA must satisfy conditions analogous to conservation…

Cellular Automata and Lattice Gases · Physics 2009-11-10 Henryk Fukś

Software engineers often have to estimate the performance of a software system before having full knowledge of the system parameters, such as workload and operational profile. These uncertain parameters inevitably affect the accuracy of…

Software Engineering · Computer Science 2018-01-16 Aldeida Aleti , Catia Trubiani , André van Hoorn , Pooyan Jamshidi

Motivated by questions in biology and distributed computing, we investigate the behaviour of particular cellular automata, modelled as one-dimensional arrays of identical finite automata. We investigate what sort of self-stabilising…

Formal Languages and Automata Theory · Computer Science 2009-11-14 Alan Gibbons , Martyn Amos

Stochastic processes govern the time evolution of a huge variety of realistic systems throughout the sciences. A minimal description of noisy many-particle systems within a Markovian picture and with a notion of spatial dimension is given…

Statistical Mechanics · Physics 2021-02-25 Andrea Pizzi , Andreas Nunnenkamp , Johannes Knolle

We propose using Probabilistic Cellular Automata (PCA) to address inverse problems with the Bayesian approach. In particular, we use PCA to sample from an approximation of the posterior distribution. The peculiar feature of PCA is their…

Computation · Statistics 2026-03-24 Danilo Costarelli , Michele Piconi , Alessio Troiani

Cellular automata (CAs) are fully-discrete dynamical models that have received much attention due to the fact that their relatively simple setup can nonetheless express highly complex phenomena. Despite the model's theoretical maturity and…

Cellular Automata and Lattice Gases · Physics 2025-07-10 Michiel Rollier , Kallil M. C. Zielinski , Aisling J. Daly , Odemir M. Bruno , Jan M. Baetens