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Biological data are extremely diverse, complex but also quite sparse. The recent developments in deep learning methods are offering new possibilities for the analysis of complex data. However, it is easy to be get a deep learning model that…

Machine Learning · Computer Science 2019-01-21 Florian Richoux , Charlène Servantie , Cynthia Borès , Stéphane Téletchéa

Link prediction is a fundamental problem in network science, aiming to infer potential or missing links based on observed network structures. With the increasing adoption of parameterized models, the rigor of evaluation protocols has become…

Other Statistics · Statistics 2026-04-09 Xinshan Jiao , Yuxin Luo , Yilin Bi , Tao Zhou

Machine learning models are increasingly used for software security tasks. These models are commonly trained and evaluated on large Internet-derived datasets, which often contain duplicated or highly similar samples. When such samples are…

Cryptography and Security · Computer Science 2026-02-02 Farnaz Soltaniani , Mohammad Ghafari

Advances in AI, and especially machine learning, are increasingly drawing research interest and efforts towards predictive process monitoring, the subfield of process mining (PM) that concerns predicting next events, process outcomes and…

Artificial Intelligence · Computer Science 2021-07-06 Hans Weytjens , Jochen De Weerdt

In recent years, there has been a surge in the development of 3D structure-based pre-trained protein models, representing a significant advancement over pre-trained protein language models in various downstream tasks. However, most existing…

Machine Learning · Computer Science 2024-06-04 Jiale Zhao , Wanru Zhuang , Jia Song , Yaqi Li , Shuqi Lu

The expanding integration of Large Language Models (LLMs) into recommender systems poses critical challenges to evaluation reliability. This paper identifies and investigates a previously overlooked issue: benchmark data leakage in…

Machine Learning · Computer Science 2026-05-27 Mingqiao Zhang , Qiyao Peng , Yinghui Wang , Hongtao Liu , Yumeng Wang

The success of Large Language Models (LLMs) relies heavily on the huge amount of pre-training data learned in the pre-training phase. The opacity of the pre-training process and the training data causes the results of many benchmark tests…

Computation and Language · Computer Science 2025-03-03 Shiwen Ni , Xiangtao Kong , Chengming Li , Xiping Hu , Ruifeng Xu , Jia Zhu , Min Yang

Machine learning (ML) models benefit from large datasets. Collecting data in biomedical domains is costly and challenging, hence, combining datasets has become a common practice. However, datasets obtained under different conditions could…

Machine-learning models contain information about the data they were trained on. This information leaks either through the model itself or through predictions made by the model. Consequently, when the training data contains sensitive…

Machine Learning · Computer Science 2021-08-25 Awni Hannun , Chuan Guo , Laurens van der Maaten

Recently, it has been shown that Machine Learning models can leak sensitive information about their training data. This information leakage is exposed through membership and attribute inference attacks. Although many attack strategies have…

Machine Learning · Computer Science 2023-03-08 Ganesh Del Grosso , Georg Pichler , Catuscia Palamidessi , Pablo Piantanida

As a practical privacy-preserving learning method, split learning has drawn much attention in academia and industry. However, its security is constantly being questioned since the intermediate results are shared during training and…

Cryptography and Security · Computer Science 2024-05-30 Fei Zheng , Chaochao Chen , Lingjuan Lyu , Xinyi Fu , Xing Fu , Weiqiang Wang , Xiaolin Zheng , Jianwei Yin

The majority of machine learning scoring functions used in drug discovery for predicting protein-ligand binding poses and affinities have been trained on the PDBBind dataset. However, it is unclear whether these new scoring functions are…

Biological Physics · Physics 2026-01-13 Jie Li , Xingyi Guan , Oufan Zhang , Kunyang Sun , Yingze Wang , Dorian Bagni , Teresa Head-Gordon

Amid the expanding use of pre-training data, the phenomenon of benchmark dataset leakage has become increasingly prominent, exacerbated by opaque training processes and the often undisclosed inclusion of supervised data in contemporary…

Computation and Language · Computer Science 2024-04-30 Ruijie Xu , Zengzhi Wang , Run-Ze Fan , Pengfei Liu

A large body of work shows that machine learning (ML) models can leak sensitive or confidential information about their training data. Recently, leakage due to distribution inference (or property inference) attacks is gaining attention. In…

Cryptography and Security · Computer Science 2022-09-20 Valentin Hartmann , Léo Meynent , Maxime Peyrard , Dimitrios Dimitriadis , Shruti Tople , Robert West

We analyze data leakage in visual datasets. Data leakage refers to images in evaluation benchmarks that have been seen during training, compromising fair model evaluation. Given that large-scale datasets are often sourced from the internet,…

Computer Vision and Pattern Recognition · Computer Science 2025-08-26 Patrick Ramos , Ryan Ramos , Noa Garcia

Secure multi-party machine learning allows several parties to build a model on their pooled data to increase utility while not explicitly sharing data with each other. We show that such multi-party computation can cause leakage of global…

Machine Learning · Computer Science 2021-06-21 Wanrong Zhang , Shruti Tople , Olga Ohrimenko

Data used to train supervised machine learning models are commonly split into independent training, validation, and test sets. This paper illustrates that complex data leakage cases have occurred in the no-reference image and video quality…

Computer Vision and Pattern Recognition · Computer Science 2021-03-02 Franz Götz-Hahn , Vlad Hosu , Dietmar Saupe

Reliable detection of bearing faults is essential for maintaining the safety and operational efficiency of rotating machinery. While recent advances in machine learning (ML), particularly deep learning, have shown strong performance in…

Machine Learning · Computer Science 2026-05-18 João Paulo Vieira , Victor Afonso Bauler , Rodrigo Kobashikawa Rosa , Danilo Silva

For distributed machine learning with sensitive data, we demonstrate how minimizing distance correlation between raw data and intermediary representations reduces leakage of sensitive raw data patterns across client communications while…

Machine Learning · Computer Science 2020-08-24 Praneeth Vepakomma , Abhishek Singh , Otkrist Gupta , Ramesh Raskar

With the growing emphasis on users' privacy, federated learning has become more and more popular. Many architectures have been raised for a better security. Most architecture work on the assumption that data's gradient could not leak…

Cryptography and Security · Computer Science 2020-03-12 Zhaorui Li , Zhicong Huang , Chaochao Chen , Cheng Hong
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