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Related papers: Optimal path for Biomedical Text Summarization Usi…

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Electronic Health Records (EHRs) provide vital contextual information to radiologists and other physicians when making a diagnosis. Unfortunately, because a given patient's record may contain hundreds of notes and reports, identifying…

Bidirectional Encoder Representations from Transformers (BERT) represents the latest incarnation of pretrained language models which have recently advanced a wide range of natural language processing tasks. In this paper, we showcase how…

Computation and Language · Computer Science 2019-09-06 Yang Liu , Mirella Lapata

Text summarization aims at compressing long documents into a shorter form that conveys the most important parts of the original document. Despite increased interest in the community and notable research effort, progress on benchmark…

Computation and Language · Computer Science 2019-08-27 Wojciech Kryściński , Nitish Shirish Keskar , Bryan McCann , Caiming Xiong , Richard Socher

Feature transformation plays a critical role in enhancing machine learning model performance by optimizing data representations. Recent state-of-the-art approaches address this task as a continuous embedding optimization problem, converting…

Machine Learning · Computer Science 2025-08-29 Yang Gao , Dongjie Wang , Scott Piersall , Ye Zhang , Liqiang Wang

Identifying critical research within the growing body of academic work is an intrinsic aspect of conducting quality research. Systematic review processes used in evidence-based medicine formalise this as a procedure that must be followed in…

Digital Libraries · Computer Science 2024-10-14 John Hawkins , David Tivey

As part of the large number of scientific articles being published every year, the publication rate of biomedical literature has been increasing. Consequently, there has been considerable effort to harness and summarize the massive amount…

Computation and Language · Computer Science 2022-03-31 Amanuel Alambo , Tanvi Banerjee , Krishnaprasad Thirunarayan , Michael Raymer

Generative pre-trained transformer (GPT) models have shown promise in clinical entity and relation extraction tasks because of their precise extraction and contextual understanding capability. In this work, we further leverage the Unified…

Computation and Language · Computer Science 2024-07-16 Kriti Bhattarai , Inez Y. Oh , Zachary B. Abrams , Albert M. Lai

Long document summarization poses a significant challenge in natural language processing due to input lengths that exceed the capacity of most state-of-the-art pre-trained language models. This study proposes a hierarchical framework that…

Computation and Language · Computer Science 2024-10-10 Yuan-Jhe Yin , Bo-Yu Chen , Berlin Chen

Despite the success of the neural sequence-to-sequence model for abstractive text summarization, it has a few shortcomings, such as repeating inaccurate factual details and tending to repeat themselves. We propose a hybrid pointer generator…

Computation and Language · Computer Science 2021-12-30 Nobel Dhar , Gaurob Saha , Prithwiraj Bhattacharjee , Avi Mallick , Md Saiful Islam

Abstractive text summarization is a challenging task, and one need to design a mechanism to effectively extract salient information from the source text and then generate a summary. A parsing process of the source text contains critical…

Computation and Language · Computer Science 2020-03-19 Haiyang Xu , Yun Wang , Kun Han , Baochang Ma , Junwen Chen , Xiangang Li

Adding linguistic information (syntax or semantics) to neural machine translation (NMT) has mostly focused on using point estimates from pre-trained models. Directly using the capacity of massive pre-trained contextual word embedding models…

Computation and Language · Computer Science 2021-04-08 Hassan S. Shavarani , Anoop Sarkar

The data available in Electronic Health Records (EHRs) provides the opportunity to transform care, and the best way to provide better care for one patient is through learning from the data available on all other patients. Temporal modelling…

Computation and Language · Computer Science 2021-07-08 Zeljko Kraljevic , Anthony Shek , Daniel Bean , Rebecca Bendayan , James Teo , Richard Dobson

Recently, neural topic models (NTMs) have been incorporated into pre-trained language models (PLMs), to capture the global semantic information for text summarization. However, in these methods, there remain limitations in the way they…

Computation and Language · Computer Science 2022-08-23 Qianqian Xie , Jimin Huang , Tulika Saha , Sophia Ananiadou

Summarisation of research results in plain language is crucial for promoting public understanding of research findings. The use of Natural Language Processing to generate lay summaries has the potential to relieve researchers' workload and…

Computation and Language · Computer Science 2023-03-28 Oliver Vinzelberg , Mark David Jenkins , Gordon Morison , David McMinn , Zoe Tieges

Biomedical queries have become increasingly prevalent in web searches, reflecting the growing interest in accessing biomedical literature. Despite recent research on large-language models (LLMs) motivated by endeavours to attain generalized…

Computation and Language · Computer Science 2024-08-06 Ankan Mullick , Mukur Gupta , Pawan Goyal

Large-scale learning of transformer language models has yielded improvements on a variety of natural language understanding tasks. Whether they can be effectively adapted for summarization, however, has been less explored, as the learned…

Computation and Language · Computer Science 2019-06-04 Andrew Hoang , Antoine Bosselut , Asli Celikyilmaz , Yejin Choi

User-generated texts available on the web and social platforms are often long and semantically challenging, making them difficult to annotate. Obtaining human annotation becomes increasingly difficult as problem domains become more…

Computation and Language · Computer Science 2023-09-19 Joseph Gatto , Sarah M. Preum

Text summarization aims to extract essential information from a piece of text and transform the text into a concise version. Existing unsupervised abstractive summarization models leverage recurrent neural networks framework while the…

Computation and Language · Computer Science 2020-10-20 Ziyi Yang , Chenguang Zhu , Robert Gmyr , Michael Zeng , Xuedong Huang , Eric Darve

Biomedical summarization requires large datasets to train for text generation. We show that while transfer learning offers a viable option for addressing this challenge, an in-domain pre-training does not always offer advantages in a BioASQ…

Computation and Language · Computer Science 2023-07-11 Dima Galat , Marian-Andrei Rizoiu

Text summarization is a fundamental task in natural language processing (NLP), and the information explosion has made long-document processing increasingly demanding, making summarization essential. Existing research mainly focuses on model…