Biomedical queries have become increasingly prevalent in web searches, reflecting the growing interest in accessing biomedical literature. Despite recent research on large-language models (LLMs) motivated by endeavours to attain generalized intelligence, their efficacy in replacing task and domain-specific natural language understanding approaches remains questionable. In this paper, we address this question by conducting a comprehensive empirical evaluation of intent detection and named entity recognition (NER) tasks from biomedical text. We show that Supervised Fine Tuned approaches are still relevant and more effective than general-purpose LLMs. Biomedical transformer models such as PubMedBERT can surpass ChatGPT on NER task with only 5 supervised examples.
@article{arxiv.2404.03598,
title = {Intent Detection and Entity Extraction from BioMedical Literature},
author = {Ankan Mullick and Mukur Gupta and Pawan Goyal},
journal= {arXiv preprint arXiv:2404.03598},
year = {2024}
}