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One way to understand the role history plays on evolutionary trajectories is by giving ancient life a second opportunity to evolve. Our ability to empirically perform such an experiment, however, is limited by current experimental designs.…

Populations and Evolution · Quantitative Biology 2012-09-25 Betul Kacar , Eric Gaucher

We introduce FiLex, a self-reinforcing stochastic process which models finite lexicons in emergent language experiments. The central property of FiLex is that it is a self-reinforcing process, parallel to the intuition that the more a word…

Computation and Language · Computer Science 2022-06-23 Brendon Boldt , David Mortensen

Whether machines can originate novel content has been debated for nearly two centuries, from Lovelace's assertion that no engine can "originate anything" to Turing's question of whether a machine can amplify ideas brought in from outside.…

Multiagent Systems · Computer Science 2026-05-19 Weiyi Kong , Shiyang Lai , Jinghua Piao , James Evans

Psychological scale refinement traditionally relies on response-based methods such as factor analysis, item response theory, and network psychometrics to optimize item composition. Although rigorous, these approaches require large samples…

Computation and Language · Computer Science 2026-03-10 Bo Wang , Yuxuan Zhang , Yueqin Hu , Hanchao Hou , Kaiping Peng , Shiguang Ni

Current repository agents encounter a reasoning disconnect due to fragmented representations, as existing methods rely on isolated API documentation or dependency graphs that lack semantic depth. We consider repository comprehension and…

Computation and Language · Computer Science 2026-02-04 Jane Luo , Chengyu Yin , Xin Zhang , Qingtao Li , Steven Liu , Yiming Huang , Jie Wu , Hao Liu , Yangyu Huang , Yu Kang , Fangkai Yang , Ying Xin , Scarlett Li

We develop a general theory of semantic dynamics for large language models by formalizing them as Continuous State Machines (CSMs): smooth dynamical systems whose latent manifolds evolve under probabilistic transition operators. The…

Machine Learning · Statistics 2025-12-08 C. M. Wyss

Many empirical studies have provided evidence for the emergence of algorithmic mechanisms (abilities) in the learning of language models, that lead to qualitative improvements of the model capabilities. Yet, a theoretical characterization…

Machine Learning · Computer Science 2025-02-10 Hugo Cui , Freya Behrens , Florent Krzakala , Lenka Zdeborová

The modelling, specification and study of the semantics of concurrent reactive systems have been interesting research topics for many years now. The aim of this thesis is to exploit the strengths of the (co)algebraic framework in modelling…

Logic in Computer Science · Computer Science 2015-02-11 Georgiana Caltais

Social order does not exist as a stable phenomenon, but can be considered as "an order of reproduced expectations." When anticipations operate upon one another, they can generate a non-linear dynamics which processes meaning. Although…

Adaptation and Self-Organizing Systems · Physics 2009-11-19 Loet Leydesdorff

Human beings possess the most sophisticated computational machinery in the known universe. We can understand language of rich descriptive power, and communicate in the same environment with astonishing clarity. Two of the many contributors…

Computation and Language · Computer Science 2021-01-01 Karthikeya Ramesh Kaushik , Andrea E. Martin

One of the biggest challenges that artificial intelligence (AI) research is facing in recent times is to develop algorithms and systems that are not only good at performing a specific intelligent task but also good at learning a very…

Artificial Intelligence · Computer Science 2018-12-31 Kushal Shah

Autocatalytic networks have been used to model the emergence of self-organizing structure capable of sustaining life and undergoing biological evolution. Here, we model the emergence of cognitive structure capable of undergoing cultural…

Physics and Society · Physics 2020-07-14 Liane Gabora , Mike Steel

We discuss the possibility of world models and active exploration as emergent properties of open-ended behavior optimization in autonomous agents. In discussing the source of the open-endedness of living things, we start from the…

Neural and Evolutionary Computing · Computer Science 2024-11-20 Kazuya Horibe , Naoto Yoshida

Mathematical methods provide useful framework for the analysis and design of complex systems. In newer contexts such as biology, however, there is a need to both adapt existing methods as well as to develop new ones. Using a combination of…

Molecular Networks · Quantitative Biology 2017-12-06 Abhishek Dey , Shaunak Sen

The paper explores how the human natural language structure can be seen as a product of evolution of inter-personal communication code, targeting maximisation of such culture-agnostic and cross-lingual metrics such as anti-entropy,…

Computation and Language · Computer Science 2023-06-13 Anton Kolonin

We introduce a novel evolutionary algorithm (EA) with a semantic network-based representation. For enabling this, we establish new formulations of EA variation operators, crossover and mutation, that we adapt to work on semantic networks.…

Neural and Evolutionary Computing · Computer Science 2015-03-02 Atilim Gunes Baydin , Ramon Lopez de Mantaras , Santiago Ontanon

Living systems, from single cells to higher vertebrates, receive a continuous stream of non-stationary inputs that they sense, e.g., via cell surface receptors or sensory organs. Integrating these time-varying, multi-sensory, and often…

Other Quantitative Biology · Quantitative Biology 2024-04-17 Daniel Koch , Akhilesh Nandan , Gayathri Ramesan , Aneta Koseska

Recent advances in large language models (LLMs) have accelerated progress toward artificial general intelligence, with inference-time scaling emerging as a key technique. Contemporary approaches leverage either sequential reasoning…

Computation and Language · Computer Science 2025-07-10 Zenan Xu , Zexuan Qiu , Guanhua Huang , Kun Li , Siheng Li , Chenchen Zhang , Kejiao Li , Qi Yi , Yuhao Jiang , Bo Zhou , Fengzong Lian , Zhanhui Kang

Spatial reasoning in partially observable environments has often been approached through passive predictive models, yet theories of embodied cognition suggest that genuinely useful representations arise only when perception is tightly…

Artificial Intelligence · Computer Science 2025-04-29 Li Jin , Liu Jia

Along with the springing up of the semantics-empowered communication (SemCom) research, it is now witnessing an unprecedentedly growing interest towards a wide range of aspects (e.g., theories, applications, metrics and implementations) in…

Human-Computer Interaction · Computer Science 2023-11-14 Zhilin Lu , Rongpeng Li , Kun Lu , Xianfu Chen , Ekram Hossain , Zhifeng Zhao , Honggang Zhang
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