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Machine learning (ML) approaches are used more and more widely in biodiversity monitoring. In particular, an important application is the problem of predicting biodiversity indicators such as species abundance, species occurrence or species…

Applications · Statistics 2021-08-18 Geneviève Robin , Cathia Le Hasif

We present new theoretical and empirical results on the probability distributions of species persistence times in natural ecosystems. Persistence times, defined as the timespans occurring between species' colonization and local extinction…

Populations and Evolution · Quantitative Biology 2012-03-21 S. Suweis , E. Bertuzzo , L. Mari , I. Rodriguez-Iturbe , A. Maritan , A. Rinaldo

In-depth studies of sociotechnical systems are largely limited to single instances. Network surveys are expensive, and platforms vary in important ways, from interface design, to social norms, to historical contingencies. With single…

Social and Information Networks · Computer Science 2018-11-06 Abigail Z. Jacobs

To effectively monitor biodiversity in streams and rivers, we need to quantify species distribution accurately. Occupancy models are useful for distinguishing between the non-detection of a species and its actual absence. While these models…

Applications · Statistics 2024-09-17 Olivier Gimenez

The post-2020 global biodiversity framework needs ambitious, research-based targets. Estimating the accelerated extinction risk due to climate change is critical. The International Union for Conservation of Nature (IUCN) measures the…

Populations and Evolution · Quantitative Biology 2024-01-12 Joaquim Estopinan , Pierre Bonnet , Maximilien Servajean , François Munoz , Alexis Joly

Marine mammals are increasingly vulnerable to human disturbance and climate change. Their diving behavior leads to limited visual access during data collection, making studying the abundance and distribution of marine mammals challenging.…

We present a case study of solar flare forecasting by means of metadata feature time series, by treating it as a prominent class-imbalance and temporally coherent problem. Taking full advantage of pre-flare time series in solar active…

Solar and Stellar Astrophysics · Physics 2021-05-26 Azim Ahmadzadeh , Berkay Aydin , Manolis K. Georgoulis , Dustin J. Kempton , Sushant S. Mahajan , Rafal A. Angryk

Ensemble forecasts of weather and climate are subject to systematic biases in the ensemble mean and variance, leading to inaccurate estimates of the forecast mean and variance. To address these biases, ensemble forecasts are post-processed…

Applications · Statistics 2016-05-25 Stefan Siegert , Philip G. Sansom , Robin Williams

Insect outbreaks are biotic disturbances in forests and agroecosystems that cause economic and ecological damage. This phenomenon depends on a variety of biological and physical factors. The complexity and practical importance of the issue…

Quantitative Methods · Quantitative Biology 2022-09-07 Gabriel R. Palma , Wesley A. C. Godoy , Eduardo Engel , Douglas Lau , Edgar Galvan , Oliver Mason , Charles Markham , Rafael A. Moral

Across many data domains, co-occurrence statistics about the joint appearance of objects are powerfully informative. By transforming unsupervised learning problems into decompositions of co-occurrence statistics, spectral algorithms provide…

Computation and Language · Computer Science 2021-11-15 Moontae Lee , Sungjun Cho , Kun Dong , David Mimno , David Bindel

The aim of the present study is to detect abrupt trend changes in the mean of a multidimensional sequential signal. Directly inspired by papers of Fernhead and Liu ([4] and [5]), this work describes the signal in a hierarchical manner : the…

Machine Learning · Computer Science 2021-06-11 Olivier Sorba , C Geissler

Stochastic simulations of cyclic three-species spatial predator-prey models are usually performed in square lattices with nearest neighbor interactions starting from random initial conditions. In this Letter we describe the results of…

Populations and Evolution · Quantitative Biology 2018-04-20 P. P. Avelino , D. Bazeia , L. Losano , J. Menezes , B. F. de Oliveira

Biogeographical regions (geographically distinct assemblages of species and communities) constitute a cornerstone for ecology, biogeography, evolution and conservation biology. Species turnover measures are often used to quantify…

Quantitative Methods · Quantitative Biology 2015-08-19 Daril A. Vilhena , Alexandre Antonelli

Mixture models are often used to identify meaningful subpopulations (i.e., clusters) in observed data such that the subpopulations have a real-world interpretation (e.g., as cell types). However, when used for subpopulation discovery,…

Methodology · Statistics 2024-03-04 Jiawei Li , Jonathan H. Huggins

While the formulation of most data assimilation schemes assumes an unbiased observation model error, in real applications, model error with nontrivial biases is unavoidable. A practical example is the error in the radiative transfer model…

Methodology · Statistics 2016-11-17 John Harlim , Tyrus Berry

Many rare weather events, including hurricanes, droughts, and floods, dramatically impact human life. To accurately forecast these events and characterize their climatology requires specialized mathematical techniques to fully leverage the…

Atmospheric and Oceanic Physics · Physics 2020-07-15 Justin Finkel , Dorian Abbot , Jonathan Weare

Joint species distribution modeling is attracting increasing attention these days, acknowledging the fact that individual level modeling fails to take into account expected dependence/interaction between species. These models attempt to…

Methodology · Statistics 2019-08-27 Alan E. Gelfand , Shinichiro Shirota

The nature of scientific and technological data collection is evolving rapidly: data volumes and rates grow exponentially, with increasing complexity and information content, and there has been a transition from static data sets to data…

Instrumentation and Methods for Astrophysics · Physics 2016-01-19 S. G. Djorgovski , M. J. Graham , C. Donalek , A. A. Mahabal , A. J. Drake , M. Turmon , T. Fuchs

We consider the analysis of high dimensional data given in the form of a matrix with columns consisting of observations and rows consisting of features. Often the data is such that the observations do not reside on a regular grid, and the…

Machine Learning · Statistics 2017-08-22 Gal Mishne , Ronen Talmon , Israel Cohen , Ronald R. Coifman , Yuval Kluger

Combining the increasing availability and abundance of healthcare data and the current advances in machine learning methods have created renewed opportunities to improve clinical decision support systems. However, in healthcare risk…

Machine Learning · Statistics 2021-06-17 Zidi Xiu , Chenyang Tao , Michael Gao , Connor Davis , Benjamin A. Goldstein , Ricardo Henao