English
Related papers

Related papers: Korean Bio-Medical Corpus (KBMC) for Medical Named…

200 papers

We present a weakly-supervised data augmentation approach to improve Named Entity Recognition (NER) in a challenging domain: extracting biomedical entities (e.g., proteins) from the scientific literature. First, we train a neural NER (NNER)…

Machine Learning · Computer Science 2019-06-04 Joel Mathew , Shobeir Fakhraei , José Luis Ambite

Named Entity Recognition (NER) for Myanmar Language is essential to Myanmar natural language processing research work. In this work, NER for Myanmar language is treated as a sequence tagging problem and the effectiveness of deep neural…

Computation and Language · Computer Science 2019-03-13 Hsu Myat Mo , Khin Mar Soe

Named entity recognition (NER) is a fundamental task in natural language processing that involves identifying and classifying entities in sentences into pre-defined types. It plays a crucial role in various research fields, including entity…

Computation and Language · Computer Science 2024-04-29 Dongsheng Wang , Xiaoqin Feng , Zeming Liu , Chuan Wang

We propose a new Named entity recognition (NER) method to effectively make use of the results of Part-of-speech (POS) tagging, Chinese word segmentation (CWS) and parsing while avoiding NER error caused by POS tagging error. This paper…

Computation and Language · Computer Science 2021-01-28 Xiao Fu , Guijun Zhang

Biomedical queries have become increasingly prevalent in web searches, reflecting the growing interest in accessing biomedical literature. Despite recent research on large-language models (LLMs) motivated by endeavours to attain generalized…

Computation and Language · Computer Science 2024-08-06 Ankan Mullick , Mukur Gupta , Pawan Goyal

Named Entity Recognition has traditionally been a key task in natural language processing, aiming to identify and extract important terms from unstructured text data. However, a notable challenge for contemporary deep-learning NER models…

Computation and Language · Computer Science 2025-08-19 Tzu-Chieh Chen , Wen-Yang Lin

Biomedical named entity recognition (BNER) serves as the foundation for numerous biomedical text mining tasks. Unlike general NER, BNER require a comprehensive grasp of the domain, and incorporating external knowledge beyond training data…

Computation and Language · Computer Science 2023-07-06 Junyi Bian , Rongze Jiang , Weiqi Zhai , Tianyang Huang , Hong Zhou , Shanfeng Zhu

The advancement of biomedical named entity recognition (BNER) and biomedical relation extraction (BRE) researches promotes the development of text mining in biological domains. As a cornerstone of BRE, robust BNER system is required to…

Information Retrieval · Computer Science 2020-08-20 Ming-Siang Huang , Po-Ting Lai , Richard Tzong-Han Tsai , Wen-Lian Hsu

Biomedical named entity recognition (NER) is a critial task that aims to identify structured information in clinical text, which is often replete with complex, technical terms and a high degree of variability. Accurate and reliable NER can…

Computation and Language · Computer Science 2023-05-30 Zhiyi Li , Shengjie Zhang , Yujie Song , Jungyeul Park

Extracting detailed clinical information from free-text medical narratives remains a practical challenge for researchers and healthcare systems. Terminology for immune-mediated and infectious diseases is especially inconsistent across…

Computation and Language · Computer Science 2026-05-29 Veysel Kocaman , Gursev Pirge , Yigit Gul , Ace Vo , Zhenya Nargizyan , David Talby

Named Entity Recognition (NER) and Relation Extraction (RE) are essential tools in distilling knowledge from biomedical literature. This paper presents our findings from participating in BioNLP Shared Tasks 2019. We addressed Named Entity…

Computation and Language · Computer Science 2019-10-09 Usama Yaseen , Pankaj Gupta , Hinrich Schütze

Large Language Models (LLMs) demonstrate remarkable versatility in various NLP tasks but encounter distinct challenges in biomedical due to the complexities of language and data scarcity. This paper investigates LLMs application in the…

Computation and Language · Computer Science 2024-07-12 Masoud Monajatipoor , Jiaxin Yang , Joel Stremmel , Melika Emami , Fazlolah Mohaghegh , Mozhdeh Rouhsedaghat , Kai-Wei Chang

The current COVID-19 pandemic has lead to the creation of many corpora that facilitate NLP research and downstream applications to help fight the pandemic. However, most of these corpora are exclusively for English. As the pandemic is a…

Computation and Language · Computer Science 2021-04-09 Thinh Hung Truong , Mai Hoang Dao , Dat Quoc Nguyen

Named Entity Recognition (NER) is a sub-task of Natural Language Processing (NLP) that distinguishes entities from unorganized text into predefined categorization. In recent years, a lot of Bangla NLP subtasks have received quite a lot of…

Computation and Language · Computer Science 2024-01-31 Niloy Farhan , Saman Sarker Joy , Tafseer Binte Mannan , Farig Sadeque

In recent years, Vietnamese Named Entity Recognition (NER) systems have had a great breakthrough when using Deep Neural Network methods. This paper describes the primary errors of the state-of-the-art NER systems on Vietnamese language.…

Computation and Language · Computer Science 2019-11-20 Binh An Nguyen , Kiet Van Nguyen , Ngan Luu-Thuy Nguyen

Recent advancements in large language models (LLMs) have led to the development of highly potent models like OpenAI's ChatGPT. These models have exhibited exceptional performance in a variety of tasks, such as question answering, essay…

Computation and Language · Computer Science 2023-04-12 Ruixiang Tang , Xiaotian Han , Xiaoqian Jiang , Xia Hu

Biomedical text mining is becoming increasingly important as the number of biomedical documents rapidly grows. With the progress in natural language processing (NLP), extracting valuable information from biomedical literature has gained…

Computation and Language · Computer Science 2019-10-21 Jinhyuk Lee , Wonjin Yoon , Sungdong Kim , Donghyeon Kim , Sunkyu Kim , Chan Ho So , Jaewoo Kang

Named entity recognition (NER) identifies typed entity mentions in raw text. While the task is well-established, there is no universally used tagset: often, datasets are annotated for use in downstream applications and accordingly only…

Computation and Language · Computer Science 2019-10-08 Xiao Huang , Li Dong , Elizabeth Boschee , Nanyun Peng

The task of Named Entity Recognition (NER) is an important component of many natural language processing systems, such as relation extraction and knowledge graph construction. In this work, we present a simple and effective approach for…

Computation and Language · Computer Science 2022-03-29 Urchade Zaratiana , Pierre Holat , Nadi Tomeh , Thierry Charnois

Named entity recognition (NER) plays an important role in text-based information retrieval. In this paper, we combine Bidirectional Long Short-Term Memory (Bi-LSTM) \cite{hochreiter1997,schuster1997} with Conditional Random Field (CRF)…

Computation and Language · Computer Science 2019-12-04 Ngoc C. Lê , Ngoc-Yen Nguyen , Anh-Duong Trinh